Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4297 ATGTGGTTGATGACAACTTGGCGGCAGAAGTGGTTGAGGAAATTGCAGATAGTTTATGGGAGCCTCCAGAGGTTCAAGAAGTGCTCGATGAAATGGGCCATCCTAGTATACCATTTAGTTATTTCGAAAGCTGCGGAACTCGAGTTCCATTATAATGTTGACAAAGCACTCTTGGGTAATAGGTGGTTGCGGAAAGCGACAAGCATACAACCGAAGTTTCCATATATGGTTGACTCCTTTGAAAGAAGAAAAAATAATAATCAAATGGGGTTGGAGGGCCATGTGATTGAAGAGAAGGTCAAAGAAGATTCATGGACATGGATAAAATACGGACAAAAACCCATTAACGGGTCTCCACATCCAAGGAGCTACTACAAATGTAATAGTTTCAGCGATTGTCCGGCAAGAAAAATGGTACAAAAAAGCAAAACCAAAAACAACACTTATGTTGTGACGTATAAGAGTGATCACGACCATATAAAACCAGCAGGTAATCTAAACTCGATGATTGGGACCTCCCTGAACAAGTCATCAGAGACTAGATTACCCGCTACAAGAGAACCTGGATCATCTTCAAATGTTGGAAACTTCCATTTGCCTAACGTGGCGGTGCTGCAGTTTGATCAACCAGAGAGCAGCAATGTTAGCAACTTCAGATCACCTAATGTGATGATGTTGCAGTTTGATCAGTTGGAGAGCAATAATGGTCAAATTTTTGCAGATGAATCAGATAAAAAAATGACTGGAAGCTTAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGCCATTTTGCTAGAAAAAATGAAAACTATATTGGAGAATTTCTTAGTAGATTTCAAGCACATTATGGCGCTTATTCCCTTAGATTGA 882 0.3968 MWLMTTWRQKWLRKLQIVYGSLQRFKKCSMKWAILVYHLVISKAAELEFHYNVDKALLGNRWLRKATSIQPKFPYMVDSFERRKNNNQMGLEGHVIEEKVKEDSWTWIKYGQKPINGSPHPRSYYKCNSFSDCPARKMVQKSKTKNNTYVVTYKSDHDHIKPAGNLNSMIGTSLNKSSETRLPATREPGSSSNVGNFHLPNVAVLQFDQPESSNVSNFRSPNVMMLQFDQLESNNGQIFADESDKKMTGSLDDDDDDDDDDDDDDAILLEKMKTILENFLVDFKHIMALIPLD* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4297 293 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4297 293 ProSiteProfiles WRKY domain profile. 96 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4297 293 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 95 287 IPR044810 GO:0003700
Tpr2g4297 293 SMART WRKY_cls 101 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4297 293 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 95 287 - -
Tpr2g4297 293 SUPERFAMILY WRKY DNA-binding domain 96 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g4297 293 MobiDBLite consensus disorder prediction 176 195 - -
Tpr2g4297 293 Gene3D WRKY domain 93 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g4297 293 MobiDBLite consensus disorder prediction 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4297 Tpr-Chr2 46372335 46390119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4297 94 179 WRKY Transcription Factor Family AT4G01250 43.023 7.60e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g4297 WRKY 1.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4297 - K13425 mtr:MTR_2g024380 174.096