Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4271 ATGGCGGCAGGACTAACCGCCACAATAACCTTACAACCCTTAAACCGTCACTATAAACCTTTGTTTCCTCATCTTCAAAAACAAACACCAACACTTATTTTTTCCCCTTTAAGATGTTTTTTACATCAAAAAACAACCTTAAAAACCCAAAGATTGAAAAACTTCACTCTTTGTGTTCTCATGGAAGACCCAAAACAAGATACCCAAATGGAAATTGAAGATGAAAAATCACCCCTTTTAGAGAATAATTATGTTCCTCAAATTGTGTCACAAAAAATGGAAGAGAAAATGAAAAGAAAAAAGTCAGAAAGGTTGACTTATCTTGTTGCAGCTGTTATGTCTAGTCTTGGTATAACATCTATGGCTGTTTTGGCTGTTTATTATAGATTTTCATGGCAAATGGAGGGTAGTGGAGAAATTCCTTGGTCAGAAATGTTTGGTACATTTGCTCTATCAGTTGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAAGGCTCTTTGGCATGCTTCCTTATGGCACATGCATGAGTCCCATCATAGAGCAAGAGAAGGAGCTTTTGAGTTGAATGATGTTTTTGCAATAATCAATGCTGTCCCTGCTATCGCTCTCCTTAACTTTGGTTTCTTCCACAAAGGTCTCATCCCTGGTCTTTGCTTTGGTGCGGGTCTTGGGATTACGGTGTTTGGGATGGCCTACATGTTTGTACACGACGGATTGGTTCATAAGAGATTCTCAGTAGGACCCATTGCCAATGTGCCCTATTTCAGAAGGGTAGCTGCTGCCCACAAACTTCACCATTCAGACAAATTCGATGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAAGAGGTGGGAGGGTTAGAAGAGCTAGAGAAAGAGATAAGTAGGAGGACAAAATCATACAATAATAGTTCATGA 939 0.4058 MAAGLTATITLQPLNRHYKPLFPHLQKQTPTLIFSPLRCFLHQKTTLKTQRLKNFTLCVLMEDPKQDTQMEIEDEKSPLLENNYVPQIVSQKMEEKMKRKKSERLTYLVAAVMSSLGITSMAVLAVYYRFSWQMEGSGEIPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRAREGAFELNDVFAIINAVPAIALLNFGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFSVGPIANVPYFRRVAAAHKLHHSDKFDGVPYGLFLGPKELEEVGGLEELEKEISRRTKSYNNSS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4271 312 PANTHER BETA-CAROTENE HYDROXYLASE 16 308 - -
Tpr2g4271 312 Pfam Fatty acid hydroxylase 155 282 IPR006694 GO:0005506|GO:0008610|GO:0016491
Tpr2g4271 312 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 16 308 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4271 Tpr-Chr2 46028441 46032026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4271 1 225 Chloroplast and Mitochondria Gene Families AT4G25700 56.140 1.86e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4271 K15746 - gmx:100785541 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0786 1 6641141 6643581 Tpr2g4271 2 46028441 46032026 ECH
Tpr2g4271 2 46028441 46032026 Tpr2g4271 2 46028441 46032026 ECH
Tpr2g4271 2 46028441 46032026 Tpr1g0786 1 6641141 6643581 PCT