Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4268 ATGGATACTAAAAATCTGATTCTACATTTCATTTTTCTCATTTTCATTCCCTTTTCATTCTCTTCTTTCATTCCTATAGATAACTATCTTCTCAACTGTGGATCAAATACCAATTCTACCCTTTTCAATAGGCTTTTCATTGGTGATGATGATAAAACCAACAAAGATTCAATTTTTCTCTCTTTAGACAAATCAATTTCCTTAACCAACCAAAACCCATCTCCAAATTTGCCTACTTTGTATCAATCTGCAAGAATTTTCACCAAAATGGGAAGTTACAGATTCATGTTGAAGCAAAATGGTACCTTCTTTGTTCGTTTTCATTTCTTTACTTTTAAGGCTCAAGGCTTTGATTTAAAAGATGCAAACTTTAGTGTCATGGTTGGTGGAAAATTGGTTATGAGTAATTTCAATGTCAATTTCAAGCATAGTAATGATAGTACTAATGATGCAATTATTAAAGAGTTTATTTTGAAAGTGGAGTCAAATTTACTTGAAATTGTGTTTAGACCTGTTAATGATTCTGGTTTTGGTTTTGGTTTTGTTAATGGTATTGAAGTGTTTTCTGCTCCTGAAGATTTTGTTGTAGATTATGGTACTAGGTTTGTTGGTCCTTTTGGTGTTAAGGAATACAAGAACCTTTCTTACAATGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTATGACATTAACTCCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATAAGGATTTTCTGATTTTTAAGGAAGCAGCTAAGACTGTAGTGAGCACTCACACACCAGATTATCAGAAAGGAGGTGCGACTCGAGAGATCGCGCCTGATAGTGTTTATATGACAGCTCAGGAGATGAATAGGGATAATCAATCCATTTTAGCTTCACAATTTAACATAACATGGAACTTTACGGTAGCTTCTGGTGGTGTTAGAGTTCGACATTTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTGCTTTACTTTGATGTGTATATCAATGGATATTCTGCATATAAGGATGTTGATTTGTCGTCTCTTACTTTCCATATGCTTGGATCTCCGCTTTATGTGGATTTTGTTGTTGATTCTGATGATTCGGGTGTTATTCAAATAAGTGTTGGACCTTCTGATCTTAGTAGTTCAATGAGGAAGAATGCGATACTTAATGGCGCAGAGATAATGAAGCTTGTGAATGTTAATGATTCAGATTCAATTGTTGCTCCTAGGAAAAAAAGGTTGGTGTTGGTGTTGGTTGGTTCGATTTTTGGAGGAATTGTTGTTTTACTTTTAGTCGTAGCTGTTTTTGTAGTTTGTTGGAGATGCAGAAAGAAGAAACCGAAACTAAGGTCAGTTGAAAGTGTAGGATGGACGCCGTTACGCGTGTTTGGAGGAAGTTCGCTTAGTAGAATGTCTTATCCGTCTCCCAGTTCTTACGGACATTTCAGTTTGAAAATCGCTTTTGCTGATATACAATTAGCAACTAACAATTTCGATGAAAGTCTAATTATAGGATCTGGTGGATTCGGTATGGTTTACAAAGGAGTTCTAAGAGACGGTGTGAAGGTTGCTGTCAAGAGAGGCATGCCAGGATCAAGACAAGGCCTTCCAGAATTCCAAAGCGAAATAACAATTTTATCCAAAATTCGACATCGCCATCTTGTTTCGCTAGTTGGATTTTGCGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTCGAGAAAGGTCCACTCAAAGATCTTTTGTATGGTTCAGAAGGACTTCAACCTTTGTCGTGGAAGCAGCGTCTCGAGATATGCATCGGTGCAGCTCGAGGTCTACACTATCTTCACACCGGTTTTTCTCAAGGAATCATCCACCGTGACATTAAATCTACCAACATTTTGCTCGATGAAAATTATGTTGCTAAGGTTGCTGATTTCGGTCTTTCAAGATCCGGACCTTGTATCAATGAAACTCATGTGAGTACCAATGTGAAAGGTAGTTTTGGTTATCTTGATCCGGAGTATTTTCGAAGACAACAACTTACGGATAAATCAGATGTTTATTCGTTCGGCGTTGTTCTTTTTGAGGTTCTTTGTGTTAGACCAGCTGTTGATCCACGACTCGATAGGGAACAAGTAAATTTAGCAGAATGGGCTCTTCAATGGCAAAGGAAAGGTATGTTAGAGCATATTATTGATCCTTATCTTGTCGGTAAGATCAAAGTAAGCTCATTGAAGAAATTTGGTGAAACCGCGGAAAAATGTTTGGCGGAAGACAGCGTTGATAGGCCGTCTATGGGTGATGTGTTATGGAATTTGGAATATTCACTTCAGCTTCAAGAACGTGATCAAGAAGTGAATGTCACATATGATGATAGCATTGATAATGCAGAATTGAATGTTACATCTTCCATAATTCCTAGGAATCCTCCTAACAGCATGAGAATAGAGGGAGATTATGATAACAATTACTCTAATGTAAGTGCTACCAAATTTTTTTCACAACTAATGACTAGTGATGGTAGATAG 2538 0.3688 MDTKNLILHFIFLIFIPFSFSSFIPIDNYLLNCGSNTNSTLFNRLFIGDDDKTNKDSIFLSLDKSISLTNQNPSPNLPTLYQSARIFTKMGSYRFMLKQNGTFFVRFHFFTFKAQGFDLKDANFSVMVGGKLVMSNFNVNFKHSNDSTNDAIIKEFILKVESNLLEIVFRPVNDSGFGFGFVNGIEVFSAPEDFVVDYGTRFVGPFGVKEYKNLSYNVLETIHRINVGGMTLTPFNDTLWRTWIPDKDFLIFKEAAKTVVSTHTPDYQKGGATREIAPDSVYMTAQEMNRDNQSILASQFNITWNFTVASGGVRVRHLVRLHFCDIVSPALNLLYFDVYINGYSAYKDVDLSSLTFHMLGSPLYVDFVVDSDDSGVIQISVGPSDLSSSMRKNAILNGAEIMKLVNVNDSDSIVAPRKKRLVLVLVGSIFGGIVVLLLVVAVFVVCWRCRKKKPKLRSVESVGWTPLRVFGGSSLSRMSYPSPSSYGHFSLKIAFADIQLATNNFDESLIIGSGGFGMVYKGVLRDGVKVAVKRGMPGSRQGLPEFQSEITILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKDLLYGSEGLQPLSWKQRLEICIGAARGLHYLHTGFSQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCVRPAVDPRLDREQVNLAEWALQWQRKGMLEHIIDPYLVGKIKVSSLKKFGETAEKCLAEDSVDRPSMGDVLWNLEYSLQLQERDQEVNVTYDDSIDNAELNVTSSIIPRNPPNSMRIEGDYDNNYSNVSATKFFSQLMTSDGR* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4268 845 Pfam Protein tyrosine and serine/threonine kinase 511 772 IPR001245 GO:0004672|GO:0006468
Tpr2g4268 845 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Tpr2g4268 845 CDD STKc_IRAK 511 777 - -
Tpr2g4268 845 Gene3D Phosphorylase Kinase; domain 1 474 580 - -
Tpr2g4268 845 SUPERFAMILY Protein kinase-like (PK-like) 478 777 IPR011009 -
Tpr2g4268 845 Gene3D - 218 405 - -
Tpr2g4268 845 Gene3D - 28 192 - -
Tpr2g4268 845 ProSiteProfiles Protein kinase domain profile. 505 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4268 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Tpr2g4268 845 Gene3D Transferase(Phosphotransferase) domain 1 581 801 - -
Tpr2g4268 845 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 798 - -
Tpr2g4268 845 Pfam Malectin-like domain 31 403 IPR024788 -
Tpr2g4268 845 PANTHER OS07G0166700 PROTEIN 16 798 IPR045272 GO:0004714|GO:0006468
Tpr2g4268 845 SMART serkin_6 505 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4268 Tpr-Chr2 46005262 46008384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4268 23 845 Receptor kinase-like Gene Family AT3G46290 48.210 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr2g4268 Malectin_like 3e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4268 - - gmx:100814974 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4268 2 46005262 46008384 Tpr2g4268 2 46005262 46008384 ECH
Tpr2g4268 2 46005262 46008384 Tpr1g0783 1 6626758 6629588 PCT