Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4264 ATGTCATCGCCGGGATTCAATGCCGGTGGTAATGGATCGTCGGAATATTTCTCCGGCAGATCAACAAACACCATCAACAACCTCACAACCACCAATAATCTCCATCATAATCTCTCTCTCTACCGAACCCAACAACAACAACAACCACTTCCTCCAATTTTTCTAGATCCTTCTTCACAGATCCCTCAACAACGCTTCATCGGAAAACGCACCTTAGCTGAATTTCAAACACAACAAAACCAAACCTACAACATCAACAACAACAATCTTAACCTTAACAACAACAATCACAATAACCATGTTCTCTCAAATCTTTTACTTCGTTCTGTAAAACCAAGAACAACAACAAATTTTCAGTTTCAAAACAATTCTCCTTCATCTTTTTCACTTCCTGAATTACAACAAAACCCTTTTAACAACATCTACCAAACGCACCGTTTAGGTGTTCCTTTACAAATGAACCCAAATTTTCATCACTACAGAACCACCTCGAATTTAACTCAAGTAATAAACCGGGTTCAAAATCAAAATCAAACCGTTGAACCGGTAGAAGAAAAAAAGATCAACAACGATCACACGCTTCTTCAAGAATTAGAAAAACAGCTTCTAGAAGATAACGACGATGATGGTGAAGCTTCTGTTATAACAACAAGTGAATGGTCAGAGACATATCAGAATCTAATTGGGCCTGGTACCGGGCCTTGTAATGGGCCTGGGCCTATTCAGGCCCAGAAACAGGTTTCTTCATCGCCTACTTCGTCTACCACGTCATCAACTTCTTCTTCAGCTGCTTCACCTGCTTCTGTTTGTTCCAAACAAACGCTAATTGAAGCTGCAAACGCTATTTCAGAAGGTAAAAACGACGTCGCTTTAGAGATCTTAACACGTTTAGTTCAGAATTTGAATCCGAATTTGATGAATTCGGATCAACGGTTAACTAATTGCATGGTTTCGGCTTTGAAATCGAGGTTGAATCCGGTTGAAAATCCACCGGTTGTTGCGGAATTGTTCAGTAGAGGACATGCTGAGTCGACTCAGTTGTTGCTTGAAAACTCGGATTGTTTCAAGGTTAGTTTCATGGCTGCGAATCTCGTAATAATGGAAGCAGCATTTGAAGAAAACGGTAACGGAAAAGGTTTCTGTGTGGTGGATTTTGAAATTGGTCAGGGGAAACAATACGTTAATCTTCTTCACGCGCTTAAAGCGCGTGAGGTTTCGGTTTCTACTGCATCGGGTTTCACGTTGAAGGTAGTTGCTGTGGCGGAGAACGGCGGCGACGAGAGAGTTAAAGCGGTGGGTGAAATGTTGAGTCGTCAAGCGGAGAAGTTAAAAATCGGTTTCGAATTTCGTATTGCAACCGTTTCTCAGAGAAAAATGAACGAGTTGACTCGTGAGTTATTAGGTTGTGACTCGGAAGAAACGCTTATTGTGAATTTCGCGTTTAAGCTGAATCGAATTCCAGATGAAAGCGTTTCAACCGAGAATCCACGCGACGAGCTTTTGAGGCGCGTGAAGAAACTCGCGCCGCGAGTGGTTACAATTGCGGAGCAAGAAATGAATTGTAATACGGCGCCGTTTTTGGCACGAGTTGCTGAGTCATGGTCTTATTATTCTGCCTTGTATGATTCTGTTGAGTCTGATTTAGGAAAAGATAACTCGGACCGAGTCAAGATTGAAGAAGGACTGAGTCGGAAATTATGTAATTCGGTGGCTTGTGAAGGTAGGGATCGGGTTGAACGGTTTGAGGTTTTTGGAAAATGGCGCGCAAGGATGAGTATGGCGGGGTTTATGTTGAAACCAATGAGTCAAAACGTTGTTGAGTCAATAAAATCGCGACTCGCTGTGAGTAATAACAACCGAGTTAACACGGGACTCAGTGTGAAAGAAGAGAACGGTGGGATTTGCTTTGGTTGGATGGGAAGAACACTCACCGTTGCTTCTGCTTGGCGTTAA 1953 0.4245 MSSPGFNAGGNGSSEYFSGRSTNTINNLTTTNNLHHNLSLYRTQQQQQPLPPIFLDPSSQIPQQRFIGKRTLAEFQTQQNQTYNINNNNLNLNNNNHNNHVLSNLLLRSVKPRTTTNFQFQNNSPSSFSLPELQQNPFNNIYQTHRLGVPLQMNPNFHHYRTTSNLTQVINRVQNQNQTVEPVEEKKINNDHTLLQELEKQLLEDNDDDGEASVITTSEWSETYQNLIGPGTGPCNGPGPIQAQKQVSSSPTSSTTSSTSSSAASPASVCSKQTLIEAANAISEGKNDVALEILTRLVQNLNPNLMNSDQRLTNCMVSALKSRLNPVENPPVVAELFSRGHAESTQLLLENSDCFKVSFMAANLVIMEAAFEENGNGKGFCVVDFEIGQGKQYVNLLHALKAREVSVSTASGFTLKVVAVAENGGDERVKAVGEMLSRQAEKLKIGFEFRIATVSQRKMNELTRELLGCDSEETLIVNFAFKLNRIPDESVSTENPRDELLRRVKKLAPRVVTIAEQEMNCNTAPFLARVAESWSYYSALYDSVESDLGKDNSDRVKIEEGLSRKLCNSVACEGRDRVERFEVFGKWRARMSMAGFMLKPMSQNVVESIKSRLAVSNNNRVNTGLSVKEENGGICFGWMGRTLTVASAWR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4264 650 Pfam GRAS domain family 272 650 IPR005202 -
Tpr2g4264 650 MobiDBLite consensus disorder prediction 242 266 - -
Tpr2g4264 650 PANTHER SCARECROW-LIKE PROTEIN 8 61 649 IPR030013 -
Tpr2g4264 650 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 649 IPR005202 -
Tpr2g4264 650 ProSiteProfiles GRAS family profile. 262 650 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4264 Tpr-Chr2 45958689 45960931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4264 41 650 GRAS Transcription Factor Family AT5G52510 46.357 1.54e-146 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr2g4264 GRAS 5.8e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4264 - - aip:107644872 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4264 2 45958689 45960931 Tpr2g4264 2 45958689 45960931 ECH
Tpr2g4264 2 45958689 45960931 Tpr1g0776 1 6561688 6564350 PCT