Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4241 ATGGTTTTTACAAGCTATCAAGTGGATTGGATGAGTTTTCTACGAGAGACAAACCGACGTAGTGGTAATAAGTGGGCTGTTGTTGATGTTCCGATCGACTTTTATCGTGATGGTCCCAATGGAAACCCTAACTTGAGCTGTAAGAGGCTTCCGTCTGGATGTATTTTGGAGGATATGCCTTATGGTTGCCAGATAACTTGGGTGGATCATTCTCAATATGATGAGAGTGCTGTCCACCAAATCTACCGTCCATTGGTTAACTCCGGCATCGCATTTGGTGCTCATAGATGGGTTGCAACTCTCAAGAGGCATTGTGAATCTCTTGCCATCCCAATGTTTACCGTACCATCTGATTACCCTGCAGCTATAAGCCCATCTGGCAAGAGTGGCTTTTTAATGCTCGCGCAGCGGATGTCTGATAGCTTCATGTCCGGAATTTGTCCTTCGTCAGCTTGCAAGTGGGACATCCTTCACATTAGTAACATGGCCAACAACGACAGGAGAATCATGTCCCGGTTAATTCAGGATGCCTCTGGTGAAAATCGTGCAATCGTGCTAAGTGCTTCAACTTCTGTTTGGATGCCGGTGTCACGGCAAAAGATGTTTTATTTCCTCCGTGATGCACGAATGAGAGGTCGGTGGGATGGTTTGTCCAACAGCGAATCAATGGAGGAGATAGTCCGCATTCCTAAAGGACAATTTGGAGATTCAGTTTCTATCATTGGTGCTGCTGCTGGTAAAGGAAACAAGAGCAACTTTCTATATCTACAAGATTCATGGATCGATAGCTCTGGCGCAATGGTCATATATTCTCCGATTAGTATGCAATCCTACAACATGGTGATGAGTAATGGTGAAGATGCTTCATTTATTCCGGTTTTGCCTTCCGGCTTTTCAATTCTTCCAGATGGCAATTCAAGTAACAAAACAATGGTCAGAAGTGACGGTAGTGGCAGCAGTGGCAGCGGTGGCAACATCGGATGCTTGCTCACGGTTGGATTACAAATGTTGCTGATCAGCAGCCGTCAATCAAGCAAGCTGACAAATGAATCAATTGTTACCGTTAATGAAATCATCTCATGCACTATTCAGAAGATCAAGAACGCTCTTGGAGTTGCATGA 1122 0.4474 MVFTSYQVDWMSFLRETNRRSGNKWAVVDVPIDFYRDGPNGNPNLSCKRLPSGCILEDMPYGCQITWVDHSQYDESAVHQIYRPLVNSGIAFGAHRWVATLKRHCESLAIPMFTVPSDYPAAISPSGKSGFLMLAQRMSDSFMSGICPSSACKWDILHISNMANNDRRIMSRLIQDASGENRAIVLSASTSVWMPVSRQKMFYFLRDARMRGRWDGLSNSESMEEIVRIPKGQFGDSVSIIGAAAGKGNKSNFLYLQDSWIDSSGAMVIYSPISMQSYNMVMSNGEDASFIPVLPSGFSILPDGNSSNKTMVRSDGSGSSGSGGNIGCLLTVGLQMLLISSRQSSKLTNESIVTVNEIISCTIQKIKNALGVA* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4241 373 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 11 371 - -
Tpr2g4241 373 SUPERFAMILY Bet v1-like 150 312 - -
Tpr2g4241 373 Pfam START domain 13 107 IPR002913 GO:0008289
Tpr2g4241 373 ProSiteProfiles START domain profile. 13 110 IPR002913 GO:0008289
Tpr2g4241 373 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 11 371 IPR042160 -
Tpr2g4241 373 SUPERFAMILY Bet v1-like 12 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4241 Tpr-Chr2 45490175 45506573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4241 8 370 Homeobox Transcription Factor Family AT3G61150 44.865 1.32e-99 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4241 K09338 - gmx:100820113 375.17