Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4232 ATGGTTGATTCTTTTTGGCACAGTAATCCTTTATCTTTGCAATGTACTGTCAACCAGTTTCATGGTTGTTATCAGAATGTATCCAACTCGAGTATCATAAGCAGTGGTGGTGAAGTTAAAGCGTGTTGGTCTGTTGTTAAGCTTCAGAGAAATTTATCAGAGTATTTATGTTTGTATTTCGTATACCTTGAACTTATGGGACCGAGTCTCGATGACGTCCTTTACTACTGTAGTGGCAAGTTTTCGCTAAAATCGGTTTTGATGTTGGCTGATCAGATGCTTACGAGGATAGAGTTTCTACATTCGAAGGGATTACTGCACAACGATATCAAACCAGATAATTTCCTCATGGGTCTTGGGAAGAAAGCAACTCAGGTTTGTATGATTGATTTTGGACTTTCAAAAGGATATATGGATCCTATCAGTTACAGGCATATCCCTTACAGAGAGAACAAAAACTTAACAGGAACAGCGTGTTATGCAAGTTGCAATACTCATAAAGGAATTGAGCAAAGTCGCAGAGATGATTTGGAGTCTCTTGGCTATGTTCTTTTGTACTTTTTAAGAGGTAGCCTTCCTTGGCAGGGTCTGCAAGCTGCCACCAGAATGCAAAAATATGAAAAATTTTACGACATGAAGTTCTCAACTCGTGTTGAGGTACTTTGCAAGTCATATCCCGTGGAGTTTGCGTCTTACTTTCATTATTGCCGCTCCTTGTCATTTGATCAACGACCAAATTATGGATATTTGAAGCGCCTGTTTCGTGAATTGTTCACTTCTAAAGGATATGAGGCTGACTATTTATATGACTGGACGATTTTAAAATATCAGGAGATTCAACAGGGAAAGGAACATAATCTATCAATTGTGCGTGATTCCTTAATTTGCCGAGTTTGA 897 0.3868 MVDSFWHSNPLSLQCTVNQFHGCYQNVSNSSIISSGGEVKACWSVVKLQRNLSEYLCLYFVYLELMGPSLDDVLYYCSGKFSLKSVLMLADQMLTRIEFLHSKGLLHNDIKPDNFLMGLGKKATQVCMIDFGLSKGYMDPISYRHIPYRENKNLTGTACYASCNTHKGIEQSRRDDLESLGYVLLYFLRGSLPWQGLQAATRMQKYEKFYDMKFSTRVEVLCKSYPVEFASYFHYCRSLSFDQRPNYGYLKRLFRELFTSKGYEADYLYDWTILKYQEIQQGKEHNLSIVRDSLICRV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4232 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Tpr2g4232 298 PANTHER CASEIN KINASE-RELATED 62 284 - -
Tpr2g4232 298 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4232 298 PANTHER CASEIN KINASE I-LIKE PROTEIN 62 284 - -
Tpr2g4232 298 Pfam Protein kinase domain 45 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4232 298 SUPERFAMILY Protein kinase-like (PK-like) 58 271 IPR011009 -
Tpr2g4232 298 SMART serkin_6 27 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4232 298 Gene3D Transferase(Phosphotransferase) domain 1 25 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4232 Tpr-Chr2 45416144 45418966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4232 65 198 MAP Kinase Kinase Kinase AT5G55090 28.358 6.22e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr2g4232 Pkinase 5.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4232 K08960 K08959 ncol:116247888 365.155