Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4225 ATGGCACCTTCTCGGGTGGCAGGAGGTTTAGCCCAATCATCATCAAGTTCTGGAATTTTCTTTCAAGGAGAGGGGCAGTCACATAATTTAGTCAACTCTCACTTGAGCTCATCTTTAGTCAACTCATCTAACACTGTTCCTGGAACTGGTCATTCCAACCTTGGTCCAGTTTCTGGGGATATGAATAACGCAATTTTGAATAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCACTCTCTGGTGACCGCCATATGCAAAGAAGTGCTAGCATTAATGGTGACTCATACTTAAGATTACCTGCATCACCTTTGTCATTCACATCAAATAATATTAGCATTTCTGGGTCACCTGCAATGGATGGTTCCTCTGTAGTACAGCAGAATTCTCATCAAGATCAGAATGCTCAACAATTGCAGCAGAATCAACAGAAGCTGCAGGGTGCTTCAAGTACTATGCATTTGCCTGCCTCTCAAACTGGCTCATCTTCGCACCAAATGGGTGCACAAGTAGCAGGATCTTTCATTCAAGATCCAAATAATATATCCCACTTGCTGAAAAAACGTAGGGTGGATATCAAACAAGAAGATATAATGCAACAACAGGTAATACAGCAGCTTCTTCAGAGACAAGACCCTACGCAATTCCAAAGTCGCAGTCCACAGTTACAGGCTATGTTTCAGCAACAGCATAGGCTTAAGCAACAACATATCTTTCAGTCATTGCCGCAGGCCCAGCGAATACAATTGCTGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAACAAATGCAGAGGCAGCAAATACAACAACAAATGATGCAGCCCTCAGCTGGTGTTAAGCGTCCACCTGATAGTGGTGTTGGAGGTGTATGTGCCCGTCGATTGATGCAGTACCTCTATCATCAAAGACAGAGACCAAGTGATAATAGTATTGCATATTGGAGGAAATTTGTGGCTGAATATTACTCTCCCCGTGCAAAGCAACGGTGGTGCTTGGCATTATATAGTAATGTTGGACACCATACAGCTGGCGTTTTACCGCAAGCAACTACGCATGCTTGGCAATGTGATATATGTGGAACTAAATCTGGAAGAAGGGGATTTGAAGCGACTTATGATATACTACCCAGACTTAACGTAGTCAAATTTGGTGGTGGCGTGATCGATGAACTTCTGTTTTTGGACTTGCCGCGTGAAATAAGATTTTCTTCTGGTTTGATGATGTTAGAATATACAAAAGCAGTTCAAGAGTGTGTGTATGAGCAGCTCCGCGTTGTTCGTGAGGGTCAGCTTCGTATTGTATTTACTCAAGACCTGAAGATATTTTCTTGGGATTTCTGTGTAAGGCGCCATGAAGAACTTCTTCCTCGAAAGTTAGTTGCACCACAGGTCAACCAATTAGTTCAAGTAGCGCAAAAATGCCAAAGTACAATTTCTGAAAGTGGGTCAGATGGGGTTTCTCAGCATGACTTGCAAACAAACAGCAACATGGTCCTAACTGCTGGGCGTCAGCTTGCAAAGAGTTTGGAGCTACAATCACTAAACGACTTGGGCTTTTCAAAAAGATTTGTGAGAACTTTGCAGATTTCTGAGGTTTGCAATAGCATGAAAGATCTAATCGATATCTGTTTTGATCACAATGTCGGAGCAATTGAGAGTTTGAAAAATTATTCTCAATTTTCAACCTCGTCAAAGCACCAAATGCAAAAGATGCAGGAGATGGAACAGGCAGCAAATGCTCAAGGTCTCCCACCTGATCGAAACACACTTAATAAACTGATGACATTGAATCCTGGATCTAACAATCTTATAAACAACAATCACAATATGGGCAATCGTGGTACTTTGTCTGGGCCATCACAAGCTGCTATGGCAATGTCCAATTACCAGAATCTTCTCATGAGACAAAACTCGATGAATTCAAGCCCCAGTTCACTTCATCGAGAAGGGTCCCCTTTTAATAACTCGATCCAGAGTCCCTCATCAGCTTCTTTGCAAGGTGCTGGTGCTGCTGCTATAATCCCAGGCTCTATGCAGAATTCACCTCACAACAGTAGTGGTGGTTTCTCAAACCAACATCTAGCCTCACAACAGCAGCGGCAGCAGCAGCAGCAGCAACAACAACACCTTCAACAGCGCTCGTTAAGTGCAAATAATTTACCTCAACAAAATCACTCACAGGGACCTCAAGGAAATCAATCACTGCAACAACAGATGATCCAGCAACTACTGCAGGATATGTCAAATAACAACGGGGGAGTGCAACAACAGTCTCATAGTGGACCCATTGTAAGTGGGAATATGGCAAAGAATAATTTGGGTTTTGGGGGACAAACTCCACCCACAGCTGGAGGAGGCTCTGCCAGTGGTCCAGCAAATAATGGACCTGTTTCAAGGAGTAATAGCTTCAAAGCTGCTTCAAACAGCGACTCTTCTGCAGCAGCTGGTGGAGGCGGCAACAATGGATTCAACCAGAGAGCATCTGATATGCAGCAAAATCTTGCTTTGCAAGATGTGGCTTCGGAATTTGGCCATGAGTTTGCGGATAACCCCTTCTTTAACAGTGATCTTGACAATAACATGGGTTTTAACTGGAAGACATGA 2640 0.4356 MAPSRVAGGLAQSSSSSGIFFQGEGQSHNLVNSHLSSSLVNSSNTVPGTGHSNLGPVSGDMNNAILNSVANSAPSVGASSLVTDANSALSGDRHMQRSASINGDSYLRLPASPLSFTSNNISISGSPAMDGSSVVQQNSHQDQNAQQLQQNQQKLQGASSTMHLPASQTGSSSHQMGAQVAGSFIQDPNNISHLLKKRRVDIKQEDIMQQQVIQQLLQRQDPTQFQSRSPQLQAMFQQQHRLKQQHIFQSLPQAQRIQLLQQQQQQQQQQQQQQMQRQQIQQQMMQPSAGVKRPPDSGVGGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKQRWCLALYSNVGHHTAGVLPQATTHAWQCDICGTKSGRRGFEATYDILPRLNVVKFGGGVIDELLFLDLPREIRFSSGLMMLEYTKAVQECVYEQLRVVREGQLRIVFTQDLKIFSWDFCVRRHEELLPRKLVAPQVNQLVQVAQKCQSTISESGSDGVSQHDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRFVRTLQISEVCNSMKDLIDICFDHNVGAIESLKNYSQFSTSSKHQMQKMQEMEQAANAQGLPPDRNTLNKLMTLNPGSNNLINNNHNMGNRGTLSGPSQAAMAMSNYQNLLMRQNSMNSSPSSLHREGSPFNNSIQSPSSASLQGAGAAAIIPGSMQNSPHNSSGGFSNQHLASQQQRQQQQQQQQHLQQRSLSANNLPQQNHSQGPQGNQSLQQQMIQQLLQDMSNNNGGVQQQSHSGPIVSGNMAKNNLGFGGQTPPTAGGGSASGPANNGPVSRSNSFKAASNSDSSAAAGGGGNNGFNQRASDMQQNLALQDVASEFGHEFADNPFFNSDLDNNMGFNWKT* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4225 879 MobiDBLite consensus disorder prediction 650 680 - -
Tpr2g4225 879 MobiDBLite consensus disorder prediction 128 177 - -
Tpr2g4225 879 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Tpr2g4225 879 PANTHER LIM DOMAIN-BINDING PROTEIN 167 718 IPR029005 -
Tpr2g4225 879 PANTHER LIM DOMAIN-BINDING PROTEIN 732 877 IPR029005 -
Tpr2g4225 879 Coils Coil 257 283 - -
Tpr2g4225 879 MobiDBLite consensus disorder prediction 692 726 - -
Tpr2g4225 879 Pfam LIM-domain binding protein 306 567 IPR029005 -
Tpr2g4225 879 MobiDBLite consensus disorder prediction 650 678 - -
Tpr2g4225 879 MobiDBLite consensus disorder prediction 794 828 - -
Tpr2g4225 879 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 167 718 - -
Tpr2g4225 879 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Tpr2g4225 879 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 732 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4225 Tpr-Chr2 45351655 45357556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4225 293 569 C2H2 Transcription Factor Family AT1G43850 55.197 8.24e-98 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4225 - - gmx:100816886 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4225 2 45351655 45357556 Tpr2g4225 2 45351655 45357556 ECH