Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4184 ATGTTTTTTGTTTCTCCCATGGATAATAATGATTGGGATCTATTTGCCATTGTGCGTAGCTGCAAAGCAAGCGCCTCTACTCCTCATGACACCATTTCTGAAAATCCATCTCCACCTCCAACCCCAACCACTACCAACACCACCACCACCACAAATAACACTATATCCCATCAAAGGGCCACACCATCTTATTTTGATAATCGTACTTCTGCCAATCGAAATAGCTCGATCTCTTTTGCCTCCCCCACCATCCCGATCCCTACCTCCACTATCCCAACAATTATTACCAATACCACAACTTCCCCCACCACAACTATCCCCAGCCTCAACACCACCATCATCCCAACAACAATCACCACCACCACCCCCACAACATTCACTACCACCGCCCTCACTTCCACTATTTGTACCCTGACAACCAGCATTGCTACCCCGGCTACAACCACTATTCCAACAATAATTACCAATCCCAACACCTTTATTCCAATCCCAACAATTACCCCCATCTACACTACCACAACCGTCACTTCCTCTAACCTCACAACCACCCCTGCTACAACCATTATCCCAACAATCATTACAAATACTACATCTTCCCCCACTGCAATTATCCCCGCATTCTCCACCGCCACCATCCCCAAAAAAATCACCTCCACCACCAATACCATCACTAACACTAACACTAGCTTCCATAACTTGAATCGAAGTTCTACCTTTTTCAATATCCCAACATTCATTGAACAACAACTGATGCAACCAAATGAGTTGACTGAGCTAGAAAAATTGACAACCACCAGATCTATCCCCACTACCACCATTATCCCAACAATTTTTAACAACACAACATCTTCCCCAACCACTATTGTCTCCACCCTTTCCATGACCTCAATCCCAACGTACATCACTACCATCAGTAACACTAATAATAGTGTTCATAACTTGAAAGAAAGTTCTACTTTTTCTTATTTCCCTACACTCATCAAACAACAAAATGAGTTGATTGAGCTAGAAAAGTTGAAACACAACTTCAATCCCAACACCACTATTTCAATCCCCACAAACACTTTCAGCACCTTCAATATCATTAATCCAAATACCACAAACACCACGATTGCCCCCATCTACACTACAAATACCTTCACTACCCCCACCCTCACATCAACTATTTGCACCCATACAACCAAAACTACTCACCCCACTATGAATAACACTAATATTAGTGTTCAAGGAACCAACCAATATCCTACCATTTCTAATTTTACAATACCCATTAAACAACAAATTCAACCAAACAACAACAATCAAGTGTTTTTTCCCAAACATCTTACCCACATTGAAATGACAAATCTTCATTTTGATCGTACATACAATCAGCCATCAGTTCCACAACAACTCCCAAGAGAGAGCAATCAACTACCTCTAGTACCCCAAATTAATTCTCAGGTTTTATCAAGTACACATCCACAAGAACCACAACACAACTCAAGAAAAAGAAAAAATAATAATCAAATGGGGTTGGAGGGCCATGTGATTGAAGAGAAGGTCAAAGAAGATTCATGGACATGGATAAAATACGGACAAAAACCCATTAACGGGTCTCCACATCCAAGGAGCTACTACAAATGTAATAGTTTCAGCGATTGTCCGGCAAGAAAAATGGTACAAAAAAGCAAAACCAAAAACAACACTTATGTTGTGACGTATAAGAGTGATCACAACCATATAAAACCAGCAGGTAATCTAAACTCGATGATTGGGACCTCCCTGAACAAGTCATCAGAGACTAGATTACCCGCTACAAGAGAACCTGGATCATCTCCAAATGTTGGAAACTTCCATTTGCCTAACGTGGCGGTGCTGCAGTTTGATCAACCAGAGAGCAGCAATGTTAGCAACTTCAGATCACCTAATGTGATGATGTTGCAGTTTGATCAGTTGGAGAGCAATAATGGTCAAATTTTTGCAGATGAATCAGATAAAAAAATTACTGGAAGCTTAGATGATGATGATGATGATGATGATGATGATGATGCCATTTTGCTAGAAAAAATGAAAACTATATTGGAGAATTTCTTAGTAGATTTCAAGCACATTATGGCGCTTATTCCCTTAGATTGA 2118 0.4051 MFFVSPMDNNDWDLFAIVRSCKASASTPHDTISENPSPPPTPTTTNTTTTTNNTISHQRATPSYFDNRTSANRNSSISFASPTIPIPTSTIPTIITNTTTSPTTTIPSLNTTIIPTTITTTTPTTFTTTALTSTICTLTTSIATPATTTIPTIITNPNTFIPIPTITPIYTTTTVTSSNLTTTPATTIIPTIITNTTSSPTAIIPAFSTATIPKKITSTTNTITNTNTSFHNLNRSSTFFNIPTFIEQQLMQPNELTELEKLTTTRSIPTTTIIPTIFNNTTSSPTTIVSTLSMTSIPTYITTISNTNNSVHNLKESSTFSYFPTLIKQQNELIELEKLKHNFNPNTTISIPTNTFSTFNIINPNTTNTTIAPIYTTNTFTTPTLTSTICTHTTKTTHPTMNNTNISVQGTNQYPTISNFTIPIKQQIQPNNNNQVFFPKHLTHIEMTNLHFDRTYNQPSVPQQLPRESNQLPLVPQINSQVLSSTHPQEPQHNSRKRKNNNQMGLEGHVIEEKVKEDSWTWIKYGQKPINGSPHPRSYYKCNSFSDCPARKMVQKSKTKNNTYVVTYKSDHNHIKPAGNLNSMIGTSLNKSSETRLPATREPGSSPNVGNFHLPNVAVLQFDQPESSNVSNFRSPNVMMLQFDQLESNNGQIFADESDKKITGSLDDDDDDDDDDDAILLEKMKTILENFLVDFKHIMALIPLD* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4184 705 MobiDBLite consensus disorder prediction 491 505 - -
Tpr2g4184 705 MobiDBLite consensus disorder prediction 652 671 - -
Tpr2g4184 705 ProSiteProfiles WRKY domain profile. 511 577 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4184 705 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 287 699 - -
Tpr2g4184 705 MobiDBLite consensus disorder prediction 44 59 - -
Tpr2g4184 705 SMART WRKY_cls 516 576 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4184 705 Gene3D WRKY domain 508 578 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g4184 705 SUPERFAMILY WRKY DNA-binding domain 511 575 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g4184 705 MobiDBLite consensus disorder prediction 483 505 - -
Tpr2g4184 705 Pfam WRKY DNA -binding domain 517 574 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4184 705 MobiDBLite consensus disorder prediction 27 59 - -
Tpr2g4184 705 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 287 699 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4184 Tpr-Chr2 44636363 44654913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4184 494 592 WRKY Transcription Factor Family AT5G52830 47.475 1.67e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g4184 WRKY 2.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4184 - K13425 mtr:MTR_8g067635 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4184 2 44636363 44654913 Tpr1g0807 1 6746526 6748204 PCT