Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g4184 | ATGTTTTTTGTTTCTCCCATGGATAATAATGATTGGGATCTATTTGCCATTGTGCGTAGCTGCAAAGCAAGCGCCTCTACTCCTCATGACACCATTTCTGAAAATCCATCTCCACCTCCAACCCCAACCACTACCAACACCACCACCACCACAAATAACACTATATCCCATCAAAGGGCCACACCATCTTATTTTGATAATCGTACTTCTGCCAATCGAAATAGCTCGATCTCTTTTGCCTCCCCCACCATCCCGATCCCTACCTCCACTATCCCAACAATTATTACCAATACCACAACTTCCCCCACCACAACTATCCCCAGCCTCAACACCACCATCATCCCAACAACAATCACCACCACCACCCCCACAACATTCACTACCACCGCCCTCACTTCCACTATTTGTACCCTGACAACCAGCATTGCTACCCCGGCTACAACCACTATTCCAACAATAATTACCAATCCCAACACCTTTATTCCAATCCCAACAATTACCCCCATCTACACTACCACAACCGTCACTTCCTCTAACCTCACAACCACCCCTGCTACAACCATTATCCCAACAATCATTACAAATACTACATCTTCCCCCACTGCAATTATCCCCGCATTCTCCACCGCCACCATCCCCAAAAAAATCACCTCCACCACCAATACCATCACTAACACTAACACTAGCTTCCATAACTTGAATCGAAGTTCTACCTTTTTCAATATCCCAACATTCATTGAACAACAACTGATGCAACCAAATGAGTTGACTGAGCTAGAAAAATTGACAACCACCAGATCTATCCCCACTACCACCATTATCCCAACAATTTTTAACAACACAACATCTTCCCCAACCACTATTGTCTCCACCCTTTCCATGACCTCAATCCCAACGTACATCACTACCATCAGTAACACTAATAATAGTGTTCATAACTTGAAAGAAAGTTCTACTTTTTCTTATTTCCCTACACTCATCAAACAACAAAATGAGTTGATTGAGCTAGAAAAGTTGAAACACAACTTCAATCCCAACACCACTATTTCAATCCCCACAAACACTTTCAGCACCTTCAATATCATTAATCCAAATACCACAAACACCACGATTGCCCCCATCTACACTACAAATACCTTCACTACCCCCACCCTCACATCAACTATTTGCACCCATACAACCAAAACTACTCACCCCACTATGAATAACACTAATATTAGTGTTCAAGGAACCAACCAATATCCTACCATTTCTAATTTTACAATACCCATTAAACAACAAATTCAACCAAACAACAACAATCAAGTGTTTTTTCCCAAACATCTTACCCACATTGAAATGACAAATCTTCATTTTGATCGTACATACAATCAGCCATCAGTTCCACAACAACTCCCAAGAGAGAGCAATCAACTACCTCTAGTACCCCAAATTAATTCTCAGGTTTTATCAAGTACACATCCACAAGAACCACAACACAACTCAAGAAAAAGAAAAAATAATAATCAAATGGGGTTGGAGGGCCATGTGATTGAAGAGAAGGTCAAAGAAGATTCATGGACATGGATAAAATACGGACAAAAACCCATTAACGGGTCTCCACATCCAAGGAGCTACTACAAATGTAATAGTTTCAGCGATTGTCCGGCAAGAAAAATGGTACAAAAAAGCAAAACCAAAAACAACACTTATGTTGTGACGTATAAGAGTGATCACAACCATATAAAACCAGCAGGTAATCTAAACTCGATGATTGGGACCTCCCTGAACAAGTCATCAGAGACTAGATTACCCGCTACAAGAGAACCTGGATCATCTCCAAATGTTGGAAACTTCCATTTGCCTAACGTGGCGGTGCTGCAGTTTGATCAACCAGAGAGCAGCAATGTTAGCAACTTCAGATCACCTAATGTGATGATGTTGCAGTTTGATCAGTTGGAGAGCAATAATGGTCAAATTTTTGCAGATGAATCAGATAAAAAAATTACTGGAAGCTTAGATGATGATGATGATGATGATGATGATGATGATGCCATTTTGCTAGAAAAAATGAAAACTATATTGGAGAATTTCTTAGTAGATTTCAAGCACATTATGGCGCTTATTCCCTTAGATTGA | 2118 | 0.4051 | MFFVSPMDNNDWDLFAIVRSCKASASTPHDTISENPSPPPTPTTTNTTTTTNNTISHQRATPSYFDNRTSANRNSSISFASPTIPIPTSTIPTIITNTTTSPTTTIPSLNTTIIPTTITTTTPTTFTTTALTSTICTLTTSIATPATTTIPTIITNPNTFIPIPTITPIYTTTTVTSSNLTTTPATTIIPTIITNTTSSPTAIIPAFSTATIPKKITSTTNTITNTNTSFHNLNRSSTFFNIPTFIEQQLMQPNELTELEKLTTTRSIPTTTIIPTIFNNTTSSPTTIVSTLSMTSIPTYITTISNTNNSVHNLKESSTFSYFPTLIKQQNELIELEKLKHNFNPNTTISIPTNTFSTFNIINPNTTNTTIAPIYTTNTFTTPTLTSTICTHTTKTTHPTMNNTNISVQGTNQYPTISNFTIPIKQQIQPNNNNQVFFPKHLTHIEMTNLHFDRTYNQPSVPQQLPRESNQLPLVPQINSQVLSSTHPQEPQHNSRKRKNNNQMGLEGHVIEEKVKEDSWTWIKYGQKPINGSPHPRSYYKCNSFSDCPARKMVQKSKTKNNTYVVTYKSDHNHIKPAGNLNSMIGTSLNKSSETRLPATREPGSSPNVGNFHLPNVAVLQFDQPESSNVSNFRSPNVMMLQFDQLESNNGQIFADESDKKITGSLDDDDDDDDDDDAILLEKMKTILENFLVDFKHIMALIPLD* | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g4184 | 705 | MobiDBLite | consensus disorder prediction | 491 | 505 | - | - | |
Tpr2g4184 | 705 | MobiDBLite | consensus disorder prediction | 652 | 671 | - | - | |
Tpr2g4184 | 705 | ProSiteProfiles | WRKY domain profile. | 511 | 577 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr2g4184 | 705 | PANTHER | WRKY TRANSCRIPTION FACTOR 14-RELATED | 287 | 699 | - | - | |
Tpr2g4184 | 705 | MobiDBLite | consensus disorder prediction | 44 | 59 | - | - | |
Tpr2g4184 | 705 | SMART | WRKY_cls | 516 | 576 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr2g4184 | 705 | Gene3D | WRKY domain | 508 | 578 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr2g4184 | 705 | SUPERFAMILY | WRKY DNA-binding domain | 511 | 575 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr2g4184 | 705 | MobiDBLite | consensus disorder prediction | 483 | 505 | - | - | |
Tpr2g4184 | 705 | Pfam | WRKY DNA -binding domain | 517 | 574 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr2g4184 | 705 | MobiDBLite | consensus disorder prediction | 27 | 59 | - | - | |
Tpr2g4184 | 705 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 287 | 699 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g4184 | Tpr-Chr2 | 44636363 | 44654913 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g4184 | 494 | 592 | WRKY Transcription Factor Family | AT5G52830 | 47.475 | 1.67e-23 | 100 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tpr2g4184 | WRKY | 2.5e-21 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g4184 | - | K13425 | mtr:MTR_8g067635 | 249.595 |