Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4149 ATGTCATCGCCGGGATTCAATGCCGGTGGTAATGGATCGTCGGAATATTTCTCCGGCAGATCAACAAACACCATCAACAACCTCACAACCACCAATAATCTCCATCATAATCTCTCTCTCTACCGAACCCAACAACAACAACAACCACTTCCTCCAATTTTTCTAGATCCTTCTTCACAGATCCCTCAACAACGCTTCATCGGAAAACGCACCTTAGCTGAATTTCAAACACAACAAAACCAAACCTACAACATCAACAACAACAATCTTAACCTTAACAACAACAATCACAATAACCATGTTCTCTCAAATCTTTTACTTCGTTCTGTAAAACCAAGAACAACAACAACAAATTTTCAGTTTCAAAACAATTCTCCTTCATCTTTTTCACTTCCTGAATTACAACAAAACCCTTTTAACAACATCTACCAAACGCACCGTTTAGGTGTTCCTTTACAAATGAACCCAAATTTTCATCACTACAGAACCACCTCGAATTTAACTCAAGTAATAAACCGGGTTCAAAATCAAAATCAAACCGTTGAACCGGTAGAAGAAAAAAAGATCAACAGCGATCACACGCTTCTTCAAGAATTAGAAAAACAGCTTCTAGAAGATAACGACGATGATGGTGAAGCTTCTGTTATAACAACAAGTGAATGGTCAGAGACATATCAGAATCTAATTGGGCCTGGTACCGGGCCTTGTAATGGGCCTGGGCCTATTCAGGCCCAAAAACAGGTTTCTTCATCGCCTACTTCGTCTACCACGTCATCAACTTCTTCTTCAGCTGCTTCACCTGCTTCTGTTTGTTCCAAACAAACGCTAATTGAAGCTGCAAACGCTATTTCAGAAGGTAAAAACGACGTCGCTTTAGAGATCTTAACACGTTTAGTTCAGAATTTGAATCCGAATTTGATGAATTCGGATCAACGGTTAACTAATTGCATGGTTTCGGCTTTGAAATCGAGGTTGAATCCGGTTGAAAATCCACCGGTTGTTGCGGAATTGTTCAGTAGAGGACATGCTGAGTCGACTCAGTTGTTGCTTGAAAACTCGGATTGTTTCAAGGTTAGTTTCATGGCTGCGAATCTCGTAATAATGGAAGCAGCATTTGAAGAAAACGGTAACGGAAAAGGTTTCTGTGTGGTGGATTTTGAAATTGGTCAGGGGAAACAATACGTTAATCTTCTTCACGCGCTTAAAGCGCGTGAGGTTTCGGTTTCTACTGCATCGGGTTTCACGTTGAAGGTAGTTGCTGTGGCGGAGAACGGCGGCGACGAGAGAGTTAAAGCGGTGGGTGAAATGTTGAGTCGTCAAGCGGAGAAGTTAAAAATCGGTTTCGAATTTCGTATTGCAACCGTTTCTCAGAGAAAAATGAACGAGTTGACTCGTGAGTTATTAGGTTGTGACTCGGAAGAAACGCTTATTGTGAATTTCGCGTTTAAGCTGAATCGAATTCCAGATGAAAGCGTTTCAACCGAGAATCCACGCGACGAGCTTTTGAGGCGCGTGAAGAAACTCGCGCCGCGAGTGGTTACAATTGTGGAGCAAGAAATGAATTGTAATACGGCGCCGTTTTTGGCACGAGTTGCTGAGTCATGGTCTTATTATTCTGCCTTGTATGATTCTGTTGAGTCTGATTTAGGAAAAGATAACTCGGACCGAGTCAAGATTGAAGAAGGACTGAGTCGGAAATTATGTAATTCGGTGGCTTGTGAAGGTAGGGATCGGGTTGAACGGGGTGAGGTTTTTGGAAAATGGCGCGCAAGGATGAGTATGGCGGGGTTTATGTTGAAACCAATGAGTCAAAACGTTGTTGAGTCGATAAAATCGCGACTCGCTGTGAGTAATAACAACCGAGTTAACACGGGACTCAGTGTGAAAGAAGAGAACGGTGGGATTTGCTTTGGTTGGATGGGAAGAACACTCACCGTTGCTTCTGCTTGGCGTTAA 1956 0.4254 MSSPGFNAGGNGSSEYFSGRSTNTINNLTTTNNLHHNLSLYRTQQQQQPLPPIFLDPSSQIPQQRFIGKRTLAEFQTQQNQTYNINNNNLNLNNNNHNNHVLSNLLLRSVKPRTTTTNFQFQNNSPSSFSLPELQQNPFNNIYQTHRLGVPLQMNPNFHHYRTTSNLTQVINRVQNQNQTVEPVEEKKINSDHTLLQELEKQLLEDNDDDGEASVITTSEWSETYQNLIGPGTGPCNGPGPIQAQKQVSSSPTSSTTSSTSSSAASPASVCSKQTLIEAANAISEGKNDVALEILTRLVQNLNPNLMNSDQRLTNCMVSALKSRLNPVENPPVVAELFSRGHAESTQLLLENSDCFKVSFMAANLVIMEAAFEENGNGKGFCVVDFEIGQGKQYVNLLHALKAREVSVSTASGFTLKVVAVAENGGDERVKAVGEMLSRQAEKLKIGFEFRIATVSQRKMNELTRELLGCDSEETLIVNFAFKLNRIPDESVSTENPRDELLRRVKKLAPRVVTIVEQEMNCNTAPFLARVAESWSYYSALYDSVESDLGKDNSDRVKIEEGLSRKLCNSVACEGRDRVERGEVFGKWRARMSMAGFMLKPMSQNVVESIKSRLAVSNNNRVNTGLSVKEENGGICFGWMGRTLTVASAWR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4149 651 MobiDBLite consensus disorder prediction 243 267 - -
Tpr2g4149 651 ProSiteProfiles GRAS family profile. 263 651 IPR005202 -
Tpr2g4149 651 Pfam GRAS domain family 273 651 IPR005202 -
Tpr2g4149 651 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 650 IPR005202 -
Tpr2g4149 651 PANTHER SCARECROW-LIKE PROTEIN 8 61 650 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4149 Tpr-Chr2 44210904 44213216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4149 41 651 GRAS Transcription Factor Family AT5G52510 46.802 1.08e-146 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr2g4149 GRAS 3.3e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4149 - - aip:107644872 657.907