Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4142 ATGGCTGATGTTTTACTTGGAATTGTGATTGAAAATCTCGGATCTTTTCTTCGGGAGGAGCTTGCAACCTTTTTGGGTGTTGATGAATTGACCAAAAAGCTATTTCGAAATCTTACCGCAATTCGAGCTGTCCTGGAAGATGCTGAAGAGAAGCAAATTAAAAGTAAATCTGTGAAAGTTTGGCTGCAAAATCTGGCTGATGCTGCTCATGTTCTTGATGATATATTGGATGAATGTTCAATAGCATCCAAAGCACATGGAGACAAGAAGTGGATCACACGTTTCCATCCTAAGAAGATTTTGGCTCGTCGCAACATTGGAAAGAGGATGAAAGTGGTTGCTGAAAAGATTGATGTTATTGCTGCAGAAAGACAGAAGTATGAATTACGAGTGGGAGTCACGGAGGAGAATCAACGAGGAGATGATGAATGGCGGCAAACTACTTCTGTTGTTGCTGAACCAAAAGTATACGGAAGAGATGGTGATAGAGAGCAAGTTGTTAAGTTTCTTCTAAGTCATGCAGTTGATAGTGAAGAACTCTCTGTCTATTCCATTGTTGGTATTGGCGGACATGGAAAAACAACACTTGCTCAAGTGGTTTTTGACGATGAAAGGTTAAAAACCCATTTTGACTTGAATATTTGGGTTTGTGTTTCTGATGATTTTAGCATGATGGCAATTTTGAAGTCCATCATAGAATCCACCAATGGAAAAAATTCAGACCTCTCGTCTTTAGAATCAACGCAAAGAGCAGTTCGAGAAATTTTGCAAAACAAAAGGTATTTACTTGTTCTTGATGATGTGTGGAGTGAAGATCCAGAGAAATGGGATAAGTTAAAGTATTTGTTGCAAGGTGGAAATGGAAAGAAAGGGTCATCCGTTCTGGTGACTACACGACTTGACATTGTTGCGTCCATTATGGGAACTTATCCTGCTCATCACTTGGGAGGTTTATCCGATGATGACGTCTGGTCTTTGTTTAAACAACAAGCTTTTGGAATTAATAGAGAAGAGCGTGCAGAGCTTGTAGCAATAGGCAAGGAGATTGTGAGAAAGTGTGCGGGTTCGCCTCTTGCTGTCAAAGTACTGGGAAGTCTTTTGCGCTTCAAAAGTGAGGAACATCAATGGCTTTCTATAAAGGAAAGTAACTTTTTGAAATTATCTGAGGATAATCGTAATAATCGTATCATGTCTGTTTTGAGACTAAGCTACTTTCATTTGAAATTATCACTGAGGCCATGTTTTACTTTTTGTGCTGTTTTTCCTAAGGATTTTGAAATGCTGAAGGAACAACTAATCCATCTTTGGTTGGCTAATGGATTTATCTCTTCCAGAGGAAATTTAGACGTGGAGCATGTTGGTCAGGAAGTGTGGAATGAGTTATATGCGTTGTCATTCTTTCAAGAAGTCAGAACTGATGAAAAGGGTAATGTTACTTTCAAAATGCATGATTTATTTCATGATTTAGCTCAGTCTATAATGGGAGAAGAATGTGTTGCTTCTGATGCTGAAAGCTTGACTAATTTGTCTGGCAGAGTTCATCATATAAGTTGTTCCTTTACTGAGTTGTTTGAAAAACCATTCAACTACAACACTATCCCTTTCAAGAAAGTTGAGTCTTTACGAACTTTTCTTGAGTTAGATATTGTTCCCTTTGGACAGTTAGGTTCGCTGCCATCAATCACTCCTCTTCGAGCATTACGTACTAGTTCTTTGCAACTTTCAGCACTAAAGAGTTTAACACATCTGAGGTACTTGGAACTTTTTGAAAGTCCCATCAAATCCTTGCCTGGGTCTGTTTGTAAGTTGCACAATTTGCAAATACTAAAACTTGATATTTGTCCGAATTTATCTAGTCTTCCCAACCAATTGACAAAATTACAAGATCTCAGGCATCTCGTGATTAAATATTGCACTTCATTAGTATCAATGCCTTCCAATATTAGTAAGTTAACTTGTCTAAAAACATTGAGCACTTTCATTGTGGGTTCGAAGATGGGGTTTGGTTTAGCAGAGTTACGTGGCTTACAACTAGGAGGCAAGTTACACATCAAAGGCCTTGAGAATGTATCAAGTGAATGGGATGCTAAAGAAGCTAATTTGATTGGTAAAAAGGAGTTAAATCGGTTATACCTATCATGGGATATTTACGCTAAGTCACAAGGCCATACTAATGTAGAGCGAGTACTCGAAGTCCTTGAGCCTCCCATAGGTCTCAAGGGTTTTGGGATGAAGGGTTATTTGGGAATACATCTTCCCAATTGGATGAGAAATACTTCTATTTTGGAAGGGTTGGTTGATGTTATACTCTACAACTGTAAAAACTGTCAGCGACTTCCTCCACTTGGTAAATTACCTTATTTAACCACTCTTTATGTATCTGGAATGAAAGATGTAAAATACATTGATGATGACTCATATGAATCTAAATCTGAGAGGGCTTTCGTTTCATTGAAGATATTGACTCTGCGTGGTTTACCAAACTTAGAGAAGATGTTGAAAGATGAAGGCGTAGAGATGCTACCACAACTTTCCTACTTAAGAATTTCATGTGTTCCCAAGTTGGCATTGCCATCCCTTCCATCTCTTGAAATCATTGATGCTGGTGGATTAAACTACGAATTTTTTTATAACTTTTCTGAGTACCGTGGTGATGAATTTGGGGATTTATTCCCAAAGGAAACTGTGTGTAATATGCATAATCTTAAGTCACTTTTTATCATACACTTCACAGGACTCGAAGTATTACCTGATGATCTACGCTCTCTTTGTGCCCTGGAGGAGCTTTACATTTCAGGGTGTGATGGACTTGAGTCATTTTCGATGCATGCATTGCAAGGTTTGAAGTCTCTTCGAACTTTGACCATTGTTTCATGTCCTAACTTAATATCCTTGTCAGAAAGTATGGGAGACTTGGCTTGTCTTGAGAGATTGAAAATCCAAGGTTGTCCACGACTTGTTTTACCAAGTAATATGAACAAGCTAACTTCCCTTCGTCAAATGGAAATTCTGGGTGACGGTGGAAACAGCAGAATGCTACAGGGCATAGAAGTTATTCCCTCCCTGCAAAATTTGACTCTAGCAAACTTTAATGAGCTGCCAGAATCGTTGGGAGCCATGAATTCTCTTCAATCAGTACATATCTTTGGGTGTCCTAACGTAAGGTCGCTACCAAATAGCTTTCAGAACCTCATAAACTTGCAATCATTGCTTATTGTTGAAAGTCCTATTTTGGAGATGCGGTGCAAGGAAAGAACTGGGGAAGATTGGCAAAAGATAGCTCACGTTCCTTCATTGAAGTTAACTGCAAAAGAAACATTACGGCAATTTAGGACTGGTTTTCCAGAATGGAAGATGGAAGTGCATTTGTTGCACCGTCTTGATGAGGACATATATATAGGAGGTTCAATCATGGATTTTGACAGGATAGTTGATGCTTTCTGA 3444 0.3873 MADVLLGIVIENLGSFLREELATFLGVDELTKKLFRNLTAIRAVLEDAEEKQIKSKSVKVWLQNLADAAHVLDDILDECSIASKAHGDKKWITRFHPKKILARRNIGKRMKVVAEKIDVIAAERQKYELRVGVTEENQRGDDEWRQTTSVVAEPKVYGRDGDREQVVKFLLSHAVDSEELSVYSIVGIGGHGKTTLAQVVFDDERLKTHFDLNIWVCVSDDFSMMAILKSIIESTNGKNSDLSSLESTQRAVREILQNKRYLLVLDDVWSEDPEKWDKLKYLLQGGNGKKGSSVLVTTRLDIVASIMGTYPAHHLGGLSDDDVWSLFKQQAFGINREERAELVAIGKEIVRKCAGSPLAVKVLGSLLRFKSEEHQWLSIKESNFLKLSEDNRNNRIMSVLRLSYFHLKLSLRPCFTFCAVFPKDFEMLKEQLIHLWLANGFISSRGNLDVEHVGQEVWNELYALSFFQEVRTDEKGNVTFKMHDLFHDLAQSIMGEECVASDAESLTNLSGRVHHISCSFTELFEKPFNYNTIPFKKVESLRTFLELDIVPFGQLGSLPSITPLRALRTSSLQLSALKSLTHLRYLELFESPIKSLPGSVCKLHNLQILKLDICPNLSSLPNQLTKLQDLRHLVIKYCTSLVSMPSNISKLTCLKTLSTFIVGSKMGFGLAELRGLQLGGKLHIKGLENVSSEWDAKEANLIGKKELNRLYLSWDIYAKSQGHTNVERVLEVLEPPIGLKGFGMKGYLGIHLPNWMRNTSILEGLVDVILYNCKNCQRLPPLGKLPYLTTLYVSGMKDVKYIDDDSYESKSERAFVSLKILTLRGLPNLEKMLKDEGVEMLPQLSYLRISCVPKLALPSLPSLEIIDAGGLNYEFFYNFSEYRGDEFGDLFPKETVCNMHNLKSLFIIHFTGLEVLPDDLRSLCALEELYISGCDGLESFSMHALQGLKSLRTLTIVSCPNLISLSESMGDLACLERLKIQGCPRLVLPSNMNKLTSLRQMEILGDGGNSRMLQGIEVIPSLQNLTLANFNELPESLGAMNSLQSVHIFGCPNVRSLPNSFQNLINLQSLLIVESPILEMRCKERTGEDWQKIAHVPSLKLTAKETLRQFRTGFPEWKMEVHLLHRLDEDIYIGGSIMDFDRIVDAF* 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4142 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 418 IPR027417 -
Tpr2g4142 1147 Gene3D Ribonuclease Inhibitor 534 879 IPR032675 -
Tpr2g4142 1147 SUPERFAMILY L domain-like 481 870 - -
Tpr2g4142 1147 Pfam Rx N-terminal domain 6 87 IPR041118 -
Tpr2g4142 1147 SUPERFAMILY RNI-like 815 1076 - -
Tpr2g4142 1147 PRINTS Disease resistance protein signature 182 197 - -
Tpr2g4142 1147 PRINTS Disease resistance protein signature 255 269 - -
Tpr2g4142 1147 PRINTS Disease resistance protein signature 353 367 - -
Tpr2g4142 1147 PRINTS Disease resistance protein signature 946 962 - -
Tpr2g4142 1147 Gene3D - 317 403 IPR042197 -
Tpr2g4142 1147 Gene3D - 6 114 - -
Tpr2g4142 1147 CDD RX-CC_like 2 121 IPR038005 -
Tpr2g4142 1147 PANTHER OS05G0414200 PROTEIN 29 968 - -
Tpr2g4142 1147 Gene3D - 139 310 IPR027417 -
Tpr2g4142 1147 Gene3D Ribonuclease Inhibitor 880 1101 IPR032675 -
Tpr2g4142 1147 PANTHER DISEASE RESISTANCE PROTEIN RP 29 968 IPR044974 GO:0006952
Tpr2g4142 1147 Gene3D - 404 493 IPR036388 -
Tpr2g4142 1147 Pfam NB-ARC domain 164 404 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4142 Tpr-Chr2 44103540 44108521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4142 179 646 WRKY Transcription Factor Family AT5G45050 23.314 2.65e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4142 - - mtr:MTR_6g052455 1433.31