Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4138 ATGTCAAGTGAAGTTGTCAAGAAAGAAGAATCACTAAATCTGAAAATCACTAGAAAAAGCTATGTGAAACCTGAGGGAAAAATAGGGAAAAAAGAGTGTCAATTGGTCACATTTGATCTACCTTACTTAGCTTTTTATTACAACCAAAAAATAATTTTATACAAAGGAGGAAACTTTGAAGAAAATGTTGAGAAACTCAAAAATGGGCTTAGTGTGGTTTTGAAAGAGTTTCATCAACTAGCTGGAAAATTAGGAAAAGATGAAGAGGGTGTGTTTTTTGTTGAATATGATGATGACATGGTTGGTGTTGAAGTTATTGAAGCTGTTGCTAATGAGATTAGTGTTGAAGATCTAACTGTTGCTGAAGGTAGTGCCATTTTGAAAGAATTGATTCCTTATAGTGGAATCTTGAATTTGGAAGGCATGCATAGACCTTTGTTGGCTGTTCAGTTAACAAAGCTCAAAGATGGGCTGGCAATGGGCTTGGCTTTTAACCATGCTGTTGTTGATGGAACTTCCACATGGCACTTCATGACTTCATGGGCCGAGGAATGCAGCAGTGCACCCCCCACAACACCCCGACCATTCCTAGAACGGACCAAGTCCCGAAACACACGGGTAAAGCTTGACCTCTCCCTACCCGAGCCCAAAAGCCCATCAACCAATGGCGAGGCAAAGCTCGAGCCCGAAGGCCCTCCCCCATCGGCCAATGGTGAGGCAAAGCCTGAGCCTGAAGGCCTACCACCATCAGCCAATGGCGGGGCAAAGCCTGTACTTAGGGAAAAGATCTTCAAATTTTCTGAGTCAGCCATCGACAAAATCAAGTCAACAGTCAACCAAACTCTTCCATCAGACGGTTCAAAACCATTCTCAACATTCCAGTCTCTCTCCGCTCATATTTGGCGTCATGTGACCCTTGCACGTGACCTAAAACCCGAAGAATATACAGTATACACCGTCTTTGCTGACTGCCGAAAACGAGTGGACCCACCAATGCCAGAGGCGTACTTCGGTAACCTAATTCAAGCCATATTCACTGTCACCGCCGCCGGACTTTTGTCAGCTCACCCGCCACAATTTGGCGCTTCTTTGATCCAAAAGGCAATTGAATCTCATGATGCTAATGCTATTGATGGACGTAACAATGAGTGGGAGAGTGAACCCAAGATTTTTCAATTCAAAGATGCTGGAGTGAATTGTGTGGCAGTTGGAAGTTCACCAAGGTTTAAGGTTTATGACATTGATTTTGGATGGGGAACACCAGAGATTGTGAGGAGTGGGACTAATAACAAATTTGATGGAATGATTTATTTGTATCCTGGCAAGAGTGGAGGTAGGAGCATTGATGTTGAGCTAACATTGGAGCCTGAGGCCATGGGAAGGTTGGAGCAAGATAAGGAATTTCTTATGGAATTATAA 1419 0.4341 MSSEVVKKEESLNLKITRKSYVKPEGKIGKKECQLVTFDLPYLAFYYNQKIILYKGGNFEENVEKLKNGLSVVLKEFHQLAGKLGKDEEGVFFVEYDDDMVGVEVIEAVANEISVEDLTVAEGSAILKELIPYSGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVVDGTSTWHFMTSWAEECSSAPPTTPRPFLERTKSRNTRVKLDLSLPEPKSPSTNGEAKLEPEGPPPSANGEAKPEPEGLPPSANGGAKPVLREKIFKFSESAIDKIKSTVNQTLPSDGSKPFSTFQSLSAHIWRHVTLARDLKPEEYTVYTVFADCRKRVDPPMPEAYFGNLIQAIFTVTAAGLLSAHPPQFGASLIQKAIESHDANAIDGRNNEWESEPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGTPEIVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMGRLEQDKEFLMEL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4138 472 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 18 468 - -
Tpr2g4138 472 Pfam Transferase family 14 468 - -
Tpr2g4138 472 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 18 468 - -
Tpr2g4138 472 Gene3D - 237 465 IPR023213 -
Tpr2g4138 472 MobiDBLite consensus disorder prediction 186 254 - -
Tpr2g4138 472 Gene3D - 11 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4138 Tpr-Chr2 44004951 44009503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4138 64 472 Monolignol Biosynthesis Gene Families AT5G48930 27.381 4.28e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4138 K19747 - gmx:100790669 729.939