Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4118 ATGGTGAATCCTTCAACCAATAACGAAATTGGCATTACAAGACAATCCCTTAATGTAGAGGCTGCTACACAAGGGAACCTTAACTCTATCCTTAAGATGACGGCGGTGGCCTCCATCGCCGCCGGCATCCAATTCGGGTGGGCCCTACAACTTTCCTTGTTAACACCATACATCCAGTTGTTGGGAGTCCCACATAAGTGGGCTGCCAACATTTGGCTATGTGGCCCAATTTCAGGCATGATTGTCCAGCCACTCGTTGGCTACTACAGTGATCGAAGCACTTCGCGTTTCGGTCGTCGTCGCCCTTTCATCTTCTTTGGCGCCATTGCAGTTGCAATTGCAATCTTCCTCATTGGCTACGCAGCCGATCTTGGCCACTCGTTAGGTGATGACCTGACGAAAAAAACACGACCCCGTGCAGTGGTCATCTTTGTTTTGGGCTTCTGGATACTTGATGTCGCCAATAATATGCTCCAGGGACCTTGTCGTGCCTTCATTGGCGACCTCGCCGCAGGTGACCACCGTCGAATGAGAACAGGCAACGGCTTATTCTCGTTCTTTATGGCTGTCGGTAATATCCTTGGTTATGCTGCTGGCTCCTACAACAAACTCCACGAAAAGTTCCCTTTCACACAGACCAAAGCTTGCGACGAGTTTTGCGCAAACCTCAAAACATGTTTCTTCTTCTCAATATTCCTCCTTGTCGTACTTTCTACCTTCGCTCTACTTTACGTAGAAGACATCCCAAATACATCGTCAAAACCACAATCAGAATCAGAACCACAAGTTTCTTCTTTCGGGGAGTTGGTAGGTGCATTCAGTGGACTCCAGAAACCGATGTGGTTGCTAATGTTAGTGACATCCATCAATTGGATTGCATGGTTCCCATTCTTCTTGTACGACACTGATTGGATGGGTCATGAAGTGTACGGTGGAAATCCAGGGGATGAGGTATACAACAAAGGAGTTCAAGCGGGGGCATTGGCACTCATGATCAATGCTGTTGTGCTTGGTTTCATGTCGTTGGCAGTGGAACCGTTGGGGCGTTTTGTTGGGGGTGCGAAGAGGTTGTGGGGGGTTGTAAATATAATTCTCGCTATTGGACTCGCAATGACGGTACTCATCACCAAGGCAGCAGAACATGAACGTCACATTAGCAACGTCGTTGGAAAACCCTCTCACGGTGTTAAGGCTGCTGCATTCTCTTTCTTCGGCATCCTTGGAATTCCTCTTGCAATTAATTTCAGTGTCCCGTTTGCTTTAGCATCTATTTATTCGAGCTCATCAGGCACCGGACAAGGTTTATCTTTGGGAGTTCTCAATATTTCAATTGTGGTTCCACAGATGATAGTATCGTCATTAGGTGGACCATGGGATTCTTTGTTTGGTGGTGGCAACTTGCCAGCGTTTGTGGTCGGTGCCGTGGCGGCAGTCATCAGTGCTATATTGGCGATTGTCCTTCTACCTAATCCAAAGCCGGAAGACATGGCTAAGGCTTCCGTTGGAGGTGGTTTTCATTAA 1521 0.4773 MVNPSTNNEIGITRQSLNVEAATQGNLNSILKMTAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGMIVQPLVGYYSDRSTSRFGRRRPFIFFGAIAVAIAIFLIGYAADLGHSLGDDLTKKTRPRAVVIFVLGFWILDVANNMLQGPCRAFIGDLAAGDHRRMRTGNGLFSFFMAVGNILGYAAGSYNKLHEKFPFTQTKACDEFCANLKTCFFFSIFLLVVLSTFALLYVEDIPNTSSKPQSESEPQVSSFGELVGAFSGLQKPMWLLMLVTSINWIAWFPFFLYDTDWMGHEVYGGNPGDEVYNKGVQAGALALMINAVVLGFMSLAVEPLGRFVGGAKRLWGVVNIILAIGLAMTVLITKAAEHERHISNVVGKPSHGVKAAAFSFFGILGIPLAINFSVPFALASIYSSSSGTGQGLSLGVLNISIVVPQMIVSSLGGPWDSLFGGGNLPAFVVGAVAAVISAILAIVLLPNPKPEDMAKASVGGGFH* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4118 506 Pfam MFS/sugar transport protein 38 294 - -
Tpr2g4118 506 PANTHER SUGAR TRANSPORTER 15 496 - -
Tpr2g4118 506 SUPERFAMILY MFS general substrate transporter 36 494 IPR036259 -
Tpr2g4118 506 CDD MFS_SLC45_SUC 35 485 - -
Tpr2g4118 506 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 496 - -
Tpr2g4118 506 Gene3D MFS general substrate transporter like domains 30 259 IPR036259 -
Tpr2g4118 506 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 493 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tpr2g4118 506 Gene3D MFS general substrate transporter like domains 277 499 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4118 Tpr-Chr2 43707765 43711189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4118 5 506 Sucrose Transporter Gene Family AT1G71890 62.745 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4118 K15378 - gmx:100782007 669.463