Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4113 ATGGCAAGAATTAGTGGAAGTAAATCTTCTTCATTGTTTTTTATTTCTTTTCTATTAGCTTCTTTAGTCCTTGTTTCCTCTGAGAGAGTAGCAAGACCTCCCATTGTGAGGGGACTAGATTGGGATTACTATTGGTTATCATGTCCTAGGGTTGAAAGGATTGTGAGAAAACATCTTGAAGATGTGTTTGAAAAAGATAGTGGAGTAGCTCCCGGTATACTCCGTCTCTTTTTCCATGATTGCTTTTCTCAGGGATGTGATGCGTCAATTTTGTTGAACGGTAATGGAACAGAAGAAAATGAAAGAAATCACCCGGCCAACTTTGGCTTAAGGGATGAAGCTCTTCAGGCCATTGAGAACATTCGTGCTATTATCCGTGTGCAGTGTCCACGTGTTGTCTCGTGCGCAGACATCCTCGTCATTGCGGCTCGCGAAGCTGTTCGCCAATTTGGAGGCCCAGATTTTGATGTACCATTGGGAAGAAAAGACAACACAATATTTGATATAGATTCACCAGACAATCTGCCAGTACCATTTGAAAGAACTGATGTACAATTAAGTGATTTTTTTGAACCAAAAAACTTTGATGCCACAGATTTAGTTGCTTTATCTGGGGCCCACACTTTTGGTAGAGCTCATTGTACTACACTATTCAATAGAACCATTGATACAAACCCACCAATTGATCCAGATTTCAAGAATCAACTTGAAGCTGCATGCCCTAAAGACAAACAATTAATTAACACTGTTAATTTGGATATTAGAACACCAATACAATTTGATAACATGTATTATATTAATCTTTTGAATCATCAGGGTGTGTTTACATCTGATCAAGATTTGGCTAGTAATCCTAAGACTAAGGAGATTGTCAACCGTTTTGCTTCTAACCAAAATGAGTTTTTTAACAAATTTGCTAATGCTTTTGTTAAGGTTAGTCAATTGGATGTTTTGACTGGCAATCAAGGAGAAATTCGTAAGTCGTGTTTTGCTCCGAATAATAAGAAAAAATCTAATGTGGCATCTGTGGTGGAAGAGGTCGTGGGAATTGCAACGAACATGTAG 1065 0.3822 MARISGSKSSSLFFISFLLASLVLVSSERVARPPIVRGLDWDYYWLSCPRVERIVRKHLEDVFEKDSGVAPGILRLFFHDCFSQGCDASILLNGNGTEENERNHPANFGLRDEALQAIENIRAIIRVQCPRVVSCADILVIAAREAVRQFGGPDFDVPLGRKDNTIFDIDSPDNLPVPFERTDVQLSDFFEPKNFDATDLVALSGAHTFGRAHCTTLFNRTIDTNPPIDPDFKNQLEAACPKDKQLINTVNLDIRTPIQFDNMYYINLLNHQGVFTSDQDLASNPKTKEIVNRFASNQNEFFNKFANAFVKVSQLDVLTGNQGEIRKSCFAPNNKKKSNVASVVEEVVGIATNM* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4113 354 Pfam Peroxidase 55 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Tpr2g4113 354 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 CDD secretory_peroxidase 38 331 IPR033905 GO:0004601|GO:0042744
Tpr2g4113 354 PANTHER PEROXIDASE FAMILY PROTEIN 20 337 - -
Tpr2g4113 354 SUPERFAMILY Heme-dependent peroxidases 38 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Tpr2g4113 354 Gene3D - 42 329 - -
Tpr2g4113 354 PANTHER PEROXIDASE 25-RELATED 20 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 Gene3D Peroxidase, domain 2 177 313 - -
Tpr2g4113 354 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4113 354 ProSiteProfiles Plant heme peroxidase family profile. 38 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4113 Tpr-Chr2 43647057 43649782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4113 12 354 Peroxidase AT1G71695 44.571 7.77e-98 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4113 K00430 - gmx:100795412 438.728