Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4106 ATGGATTTCTTTCAAAACACAATTGCAATTGTTCTCCTTTCAACAGTCATTCTCTTCATATTTCTATTCCATCATTCCAAATCCAACAAAACCAAACAACCCCCAATGGTTCCTGGTGCATGGCCAATAATTGGTCACCTTCCTCTCTTAAGCAAATCTCCAGCAACTCATCATCTTTTTGGTGCCATGGCTGACAAACATGGTCCTCTTTTCACCATCAAACTCGGCACAGCAACAACTCTTGTGATCAACAATTGGGAAACCGTGAAAGAATGCTATACAACAAACGACATTGCTGTGTCCTTTCGTCCAAACCTCGTTGCATTCGAACACATGACATATAATTATGCCATGGTTGGTTTTGCACCTTACGGTCCCTTTTGGCGCGAAATGAGGAAAATTGTTACGTTAAGTTTTCTATCAAATCATAGAATCGATCTATTAACTCACGTTCGTGTGTCTGAAGTTCAAACTTCGATCAGAGAACTTTTTAGTTCTTGGAAAAATAAAAAAGACGAAAAGGGATATTTATTAGTCGAGATGAAGAAATGGTTTCATGAGTTGGCTTTTAATACCGCGCTTCAAATGGTTGCTGGGAAGAGATATTTTGGTGAGAGTGTGATGGTGAAAGAAGAAGAAGCGAATCGATGTTTGAATGCTTTGAGAGATTATATGCGTTTGATTGGTGTTTTTCCTATTGCTGATGCTGTTCCATTTTTAAGGTTGTTTGATTTTGGTGGACATGAGAAGAATATGAAGGAAAATTTTAAGGAATTGGATGGTGTTGTGACAGAGTGGTTAGATGAGCATAAGAAGAAGAGGGTTGATGATAAGAGTAAAAAAGATCAAGATTTTATGGATGTGATGCTTTCTACTATTGATGGAACAAATATTCATGGATTTGATTCAGATACTGTCATCAAAGCCACAACTCTGGCACTAGTTTTGGGAGCAACAGACACTAGCAGTGTAACACACATATGGGCATTGTGCTTATTATTGAACAATCCTCATGCACTGGAAAAAGTTAAAGAAGAAATCGATCTCCACATCGGCAAAGAGCGACTATGCATTACTGAATCAGATATAAATAAGTTGGTGTACCTTCAAGCCGTTGTCAAAGAAACACTAAGGTTGTATCCAGCATCTCCGCTCTCAGGAATTCGCGAATTTAGAGAAGATTGCAAAATTGGTGGCTACCATGTGAAGAAAGGAACTCGACTATTCACAAACTTGTGGAAGATCCAAACCGACCCTAGTGTTTGGTCGGATCCATTGGAGTTCAAGCCTGAGAGATTTCTTACGACTCATAAAGATGTTGATGTTAAGGGTCAGCATTTTGAATTCTTACCATTTGGAAGCGGAAGAAGAATTTGTCCCGGAATATCTTTCGCTCTTCGAAGTGCTTATTTGACTCTTGCAAATTTTCTTCACTCCTTTGAAGTCTTGAAAACTTCTAGTGAGCCTATTGATATGACTGCTGTTGTGGAAACAACCAACATCAAAGTTACTCCTCTTGAAGTTCTCATCAAGCCTCGTTTGGCTCCTAATTATTATGAAAATATGCAATCATTTATAACTAGCATATGA 1590 0.3843 MDFFQNTIAIVLLSTVILFIFLFHHSKSNKTKQPPMVPGAWPIIGHLPLLSKSPATHHLFGAMADKHGPLFTIKLGTATTLVINNWETVKECYTTNDIAVSFRPNLVAFEHMTYNYAMVGFAPYGPFWREMRKIVTLSFLSNHRIDLLTHVRVSEVQTSIRELFSSWKNKKDEKGYLLVEMKKWFHELAFNTALQMVAGKRYFGESVMVKEEEANRCLNALRDYMRLIGVFPIADAVPFLRLFDFGGHEKNMKENFKELDGVVTEWLDEHKKKRVDDKSKKDQDFMDVMLSTIDGTNIHGFDSDTVIKATTLALVLGATDTSSVTHIWALCLLLNNPHALEKVKEEIDLHIGKERLCITESDINKLVYLQAVVKETLRLYPASPLSGIREFREDCKIGGYHVKKGTRLFTNLWKIQTDPSVWSDPLEFKPERFLTTHKDVDVKGQHFEFLPFGSGRRICPGISFALRSAYLTLANFLHSFEVLKTSSEPIDMTAVVETTNIKVTPLEVLIKPRLAPNYYENMQSFITSI* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4106 529 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PANTHER CYTOCHROME P450 82C3-RELATED 1 521 - -
Tpr2g4106 529 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 521 - -
Tpr2g4106 529 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Tpr2g4106 529 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 Pfam Cytochrome P450 35 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4106 529 Gene3D Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4106 Tpr-Chr2 43566987 43570089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4106 16 519 Cytochrome P450 AT4G31970 47.750 8.58e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4106 - - gmx:100802193 761.911