Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4102 ATGGCTAATAATGATTGGGATCTATATTCCATCGTGTCTAGCAACAAAGTTACCACCTTTAATAAACATGCAACAATTTTTGAAACTTCATCTCTACCCCAAACTTCAACCACCATAACCACCACTAATAACATAGTTTCGCCTCAAAACACCACACCTTCTTACTTTAATGACTTCAATCTTACCCATGAAAGTAGTGGAGTTCACATGCCCCCTTCCTCCCCAACCCACACCACCTTTATCCCGATGCCCTCCTCCCCCACTAACATCAACCCCAACACCACCACTGCCATCGCTGATACTAGTTTTCAATACTCATATCAAAATGTTAATTATTCAATCTTCAATGAACAACAACAGATGCAATCAAATGATTGGGATCTTTATTCCATTGTGTCTAGCAACAAAGTTACTACCTTTACTAATCCTACAACAAATTTTGAAACTTCGTCTCTACCCCAAACTTCAACCACCATAACCACCACCAATAACATAGTTTCGCCTCAAAAAACCACACCTTCTTACTTTAATGATTTCAATCTTACCCATGAAAGTAGTGGAGTTCACATGCCCCCTTCCTCCCCAACCCACACCACCTTTATCCCGATGCCCTCCTCCCCCACTAACATCAACACCACTACTGCCATCGCTGATACTAGTGTTCAATACTCATATCAAAATGCTAATTATTCAATATTCAATGAACAACAACATATGCAATCAAATGATTGGGATCTTTATTCCATTGTGTCTAGCAACAAAGTTACTACTTTTACTAATCCTACAACAAATTTTGAAACTTCATCTCTACCTCAAACTTCAACCACCATAACCACCACCAATAACATAGTTTCCCCTCAAAACACCACACCTTCTTACTTTAATGATTTCAATCTTACCCATGAAAATAGTGTAGTCCCCATGCCCTCCTCCCCCACCCACACCACCTTTATCCTGATTCCCTCCTCCCCCACTAACATCAACACCACCACTGCCATCACTGATACTAGTGTTCAATACTCATATCAAAATGCTATTTATCCAATATTTAGCGAACAACAACAGATGCAATCAAATAATTGGGATCTTTATTCCATTGTGTCTAGCAACAAAGGTACCACCTTTACTAATCCTGCGACAATTTTTGATGCTTCATCTCTACCTAAAACTTCAACCACCATAACCACCACTAATAACATAGTTTCACCTCAAAACACCACACCATCTTACTTCAATCATTTCAATTTCACCAATAAAAATAGTGCAGTCCCCATGCCCTTCGCCCCTACTCACACCACCTTTATCCCCATGCACTCCTCCCCCACTAACAACACCACCACCACCACCATTATCCCCACACATACCACTACAACCACCGCCATCACAAATACTAGTGTTCAGTGTTCAAATCACAATTCTACCTTTTTTGATTATCCAATATTCAGTGAACAACAACAGATGCAATCAAATGCTTGCACTGAATTAGAAAAAATGTTAATCAAATATGATTCGACCATCACCACCACCACTACCACCACCTTCACTCTCCCCATTTCCAATACCACTGCTTTCACAATCCCCAAAACCGCAACCACTATCCCTACCGGAACCACCTCCAGCACAACCATTATCCCAACCATCACACCCATTACTAACACAATCACTAGTTTTTATGGTACCAATCAAAATGCTACCTTTTCTAATCTTCCAACATTGATCAATCAACACCAAATTCAACCAAACAACGAAAATCAAGTGTTTGTTCCCAAACCTTACATCGAAACCACAACTGCTGATTTTGATCGTGCATACAACCAACCAATATTTTCACCGCAACCAATTGCACATCCACAACAACCAAAATCCACATCAAGAAAAAGAAATTATAAAAATAGGGAGACATTGGAGCGCCATATGAGTGAAGAACAACTATCAGAAGATCTGTGGGCATGGAAAAAATATGGAGAAAAAACTATTAAAGGGTCTCCACATTCAAGGAACTACTACAAATGTTCGAGTTTTGTAGATTGTCCAGCAAGAAAAATAGTAGAAAAAAGTAAAACCAACGAGAACATTTATGTTGTCACTTTTGAGGGAGTGCACAACCATGCACCACCAGAGCGAAAATCCCAAAAAAGTCATAAAAGACAAGATTGA 2157 0.3955 MANNDWDLYSIVSSNKVTTFNKHATIFETSSLPQTSTTITTTNNIVSPQNTTPSYFNDFNLTHESSGVHMPPSSPTHTTFIPMPSSPTNINPNTTTAIADTSFQYSYQNVNYSIFNEQQQMQSNDWDLYSIVSSNKVTTFTNPTTNFETSSLPQTSTTITTTNNIVSPQKTTPSYFNDFNLTHESSGVHMPPSSPTHTTFIPMPSSPTNINTTTAIADTSVQYSYQNANYSIFNEQQHMQSNDWDLYSIVSSNKVTTFTNPTTNFETSSLPQTSTTITTTNNIVSPQNTTPSYFNDFNLTHENSVVPMPSSPTHTTFILIPSSPTNINTTTAITDTSVQYSYQNAIYPIFSEQQQMQSNNWDLYSIVSSNKGTTFTNPATIFDASSLPKTSTTITTTNNIVSPQNTTPSYFNHFNFTNKNSAVPMPFAPTHTTFIPMHSSPTNNTTTTTIIPTHTTTTTAITNTSVQCSNHNSTFFDYPIFSEQQQMQSNACTELEKMLIKYDSTITTTTTTTFTLPISNTTAFTIPKTATTIPTGTTSSTTIIPTITPITNTITSFYGTNQNATFSNLPTLINQHQIQPNNENQVFVPKPYIETTTADFDRAYNQPIFSPQPIAHPQQPKSTSRKRNYKNRETLERHMSEEQLSEDLWAWKKYGEKTIKGSPHSRNYYKCSSFVDCPARKIVEKSKTNENIYVVTFEGVHNHAPPERKSQKSHKRQD* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4102 718 SMART WRKY_cls 645 705 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4102 718 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 360 709 - -
Tpr2g4102 718 MobiDBLite consensus disorder prediction 608 627 - -
Tpr2g4102 718 Pfam WRKY DNA -binding domain 646 703 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4102 718 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 360 709 IPR044810 GO:0003700
Tpr2g4102 718 SUPERFAMILY WRKY DNA-binding domain 639 706 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g4102 718 ProSiteProfiles WRKY domain profile. 640 706 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g4102 718 MobiDBLite consensus disorder prediction 699 718 - -
Tpr2g4102 718 Gene3D WRKY domain 631 707 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g4102 718 MobiDBLite consensus disorder prediction 702 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4102 Tpr-Chr2 43538956 43541545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4102 624 706 WRKY Transcription Factor Family AT5G52830 54.217 2.81e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g4102 WRKY 3.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4102 - K13425 mtr:MTR_8g069935 246.128