Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4080 ATGGCAGAGTTAATTGCTGGAGCATTTCTTTCTTCTTTCTTTCAATTCACTCTTGAGAGATTTGCCTCAAGAGACTTCAAAGACATCTTCCATAAAGGGTTGGTAGAAAGACTTGAAATCACACTGAATTCTATCAATCAATTGTTGGATGATGCAGAGACAAAGCAATACCAAAACCCGCACGTGACGAATTGGCTTGATCAACTAAAACATGTGGTATATGAAGTAGATCAACTGTTAGATAAAATTTCTACTAAGGTACGACGACAGAGCAAGGGGAAACGCTTATTTTCAACTTTGACTAATCCATTTGAATCTAGGATCAAAGATTTGTTAGGCAAGCTAAACTTTCTTGCAGAGCAAAAGGATGTGTTGGGATTGAAAGAAGAAAGGTTGTCTCATAATGAACTTGATGTTGGGCTAAAATATTCAATAAGACTGCCAATGACGTCTTTGGTTGATGAATCTAACATATTTGGTAGAAAGGGTGATAAAGAAGAAATAATCAATTTTTTACTTTTAGATAATGGTATTAGCAACCACACACCATTAATCAGCATAATTGGTCTTGGTGGGATGGGTAAGACAACCCTTGCTCAGATTGTGTACAATGATCACATGATTCAGAAGAGCTTTGATCTTAAAGCTTGGGTTTATGTTTCAGAATCTTTTAATGTTGTTGGACTCACTAAAGCAATTCTTGAGTCATTTGATTGTTCACCAAATAGTGAAAACTTGGAACCACTTCAACGCCAACTGCAACAGAAGCTAGCAGGAAGAAAATATTTGCTTGTTCTAGATGATGTTTGGAATGGGGAAATTTGGGACCGTTTGCTACTTCCCTTTAACAAAGGATCTCCTGGAAGTAAGATTATTGTGACAACACGGAACAGGGAGGTTGCAACATCCATGAAATCCACCATGTTGCTTGATTTAAAGCGACTAGAGGAGAGTGATTGTTGGAGTTTATTTGTGAAACTTGCATTTCATAACAGAAATGTGAGTGAATATCCAATTTTTGAATCAATTGGCAAGAATATTGTAGACAAGTGTGGAGGGTTGCCATTAGCAGTAAAAACATTGGGGAACCTCTTGAGAAGAAAATTCTCTCAAAGTGAATGGGTTAAGATATTGGAGACTGATTTGTGGTGTTTATCAGAGAGCGACAGTAAAATAAATCCAGTATTAAGATTGAGTTACCATAATCTTCCTTCCAATCTGAAGCGTTGTTTTGCTTATTGTTCCATATTTCCCAAGGGTTACAAGTATGACAAGAACCAATTAATCAATCTTTGGATGGCAGAAGGTTTGTTGAAGTGTTGCAGAGGAGACAAAAGTGAAGAAGAGTTGGGTAATGAATCATTCAATGATCTAGAGTCAATTTCATTTTTCCAACAATCACTATATCTTGGTGTTAAGTGCTACATCATGCATGATCTTGTCAATGATTTGGCGAAATCAGAGTCCCAAAAATTTTGCTTACAAATTGAGGGTGATACAGTGCAAGATATATCTGAAAGGACACGTCACATTTGGTGCTCTCTTGATTTTAAAGATGATGCTAGAATATCAAACCAAATTTGTAAGATTAAAGGATTACGCAGCCTGTTGGTAGAAAGACAATTTTATCAAGGCGAACAAATCATGATAAGCAACAACTTGCAACGTGATATATTTTCAAAACTAAAATATTTGCGAATGTTGTCATTTCGTGGTTGTGAACTCACAATGCTAGCAGATAAGATAGGCACTTTAAAGCTTTTGCGCTATCTTGACCTTACAAGAACAAAGATTACAAGCTTGCCAGATTCTATTTGTGAGCTCTATAATCTAGAGACTCTAATATTGGAAGAGTGTTCTGAATTGACTGAACTACCTTTAAATTTTTACAAACTTGTTTGTTTACGTCATCTTTATCTGAATGGAACTTATATTAAGAAGATGCCAAAGAAGATAGGGACGCTAAATCATCTTCAAACGATGAGTCATTTTGTTGTGGGTGAGAAGCGTGAATTTGATATTAAGGAGTTGGATAATCTCAATCTTCTTGAAGGAAAACTGAGTATTTCAGGGTTGGAACATGTCATTAATCCCGCAGATGCAGCCGAAGCAAATATGAAAGATAAGAAGCATCTAGAAGAATTAAGTGTGAATTATAGTGAGAATTTCAAATTCAATAACAATGGAAGAGAGTTGGATGTCTTGGAGGCCTTTCAACCAAATAGCAACTTGAAGAGGCTCACCATTGAACACTACAATGGTAACTCTTTTCCAAATTGGCTAAGGGATTGTCATTTACCCAACTTAGCATCTCTTAAACTACAACACTGTAAACTATGTTCACATTTGCCGCCACTTGGTCAGCTTCCTTTTCTGAAGGAGCTTTTCATTTCACATTGTGATGGAATAAATATCATCGGCAAAGAGTTTTATGACAATAGTAATTCAACAAGTCTTCCATTCAGGTCCCTTGAAGTTTTGGAATTTAAGCAGATGGAGAATTGGGAGGAGTGGTTATGCCTTGAAGGGTTTCCTTTGCTTAAAGTGCTTTCTATAACCAATTGTCCCAAATTGAAAAGAGCACCACCTCAACACCTTCCTTCTTTACAAATATTGAAGATTAGTGATTGCAAAATGTTGGAAGCATCAATTACCAAGGGTGATAGTATCATAGAGTTATGTTTGGAGAGATGTGATAGAATTTTGATAAATGAATTGCCGACCAGCTTGAAACACTTTGTTCTTTGGCAAAATCGTTACACCGAGTTCTCCGCAGAGCAAAATTTACTCAACAGTACCAATCTTGTAGAGTTGAAGTTTGATTTTAGTGGCTTTGTAAAACATCCCTCTTTAGATTTGCATTGCTATAATTCTGTTGGTCTACTTGGTCTAAGAGGCTGGCGCTCCCTCTCCTTTCCCTTTGAACTACACTTATTCACCAATCTTATTTCTCTCTTGTTGAACGATTTCCCAGAGATGGAATCATTTCCAAGGGGAGGTTTGCCTTCCAACTTGCAATTGCTTGTAATAAGAAATTTCCCTAAATTAATTTCCTTGGGGGGAGAGGACTGGAATTTGTTCAAACTCAATTCCTTCTATTTGGCTGACTGTCCAGAGCTGGAGTCGTTCCCAAGGGGAGGTTTGCCTGCCGACTTGAGATTGCTTGAAATACAGAATTGCCCTAAACTGATTGCTTCGAGAATGGAGTGGGGTTTGTTTCAACTCAATTCTTTGAAATTTTTCAAAGTTAGTGATCATGAGTTTGAAAATGTGGATTCCTTTCCAGAGGAGAATCTACTGCCACCAACACTTGTGTCTCTTTCTTTGACAAATTGTTCAAAGCTAAAAATAATGAACTACAAGGGTTTTCTCCACCTCAAATCTCTCAAGGATCTAATGATTCTTAACTGCCCTAGTCTTGAGCGCTTGCCAGAGGAGGGTCTACCCAGCTCCATTTCTCGTTTGCGGATTTCTGATTGTCCATTAATAAAGGAAAAGTACGAAAAGGAGGGAGGAGTCAGGATAGCTTTGGCATAA 3537 0.3735 MAELIAGAFLSSFFQFTLERFASRDFKDIFHKGLVERLEITLNSINQLLDDAETKQYQNPHVTNWLDQLKHVVYEVDQLLDKISTKVRRQSKGKRLFSTLTNPFESRIKDLLGKLNFLAEQKDVLGLKEERLSHNELDVGLKYSIRLPMTSLVDESNIFGRKGDKEEIINFLLLDNGISNHTPLISIIGLGGMGKTTLAQIVYNDHMIQKSFDLKAWVYVSESFNVVGLTKAILESFDCSPNSENLEPLQRQLQQKLAGRKYLLVLDDVWNGEIWDRLLLPFNKGSPGSKIIVTTRNREVATSMKSTMLLDLKRLEESDCWSLFVKLAFHNRNVSEYPIFESIGKNIVDKCGGLPLAVKTLGNLLRRKFSQSEWVKILETDLWCLSESDSKINPVLRLSYHNLPSNLKRCFAYCSIFPKGYKYDKNQLINLWMAEGLLKCCRGDKSEEELGNESFNDLESISFFQQSLYLGVKCYIMHDLVNDLAKSESQKFCLQIEGDTVQDISERTRHIWCSLDFKDDARISNQICKIKGLRSLLVERQFYQGEQIMISNNLQRDIFSKLKYLRMLSFRGCELTMLADKIGTLKLLRYLDLTRTKITSLPDSICELYNLETLILEECSELTELPLNFYKLVCLRHLYLNGTYIKKMPKKIGTLNHLQTMSHFVVGEKREFDIKELDNLNLLEGKLSISGLEHVINPADAAEANMKDKKHLEELSVNYSENFKFNNNGRELDVLEAFQPNSNLKRLTIEHYNGNSFPNWLRDCHLPNLASLKLQHCKLCSHLPPLGQLPFLKELFISHCDGINIIGKEFYDNSNSTSLPFRSLEVLEFKQMENWEEWLCLEGFPLLKVLSITNCPKLKRAPPQHLPSLQILKISDCKMLEASITKGDSIIELCLERCDRILINELPTSLKHFVLWQNRYTEFSAEQNLLNSTNLVELKFDFSGFVKHPSLDLHCYNSVGLLGLRGWRSLSFPFELHLFTNLISLLLNDFPEMESFPRGGLPSNLQLLVIRNFPKLISLGGEDWNLFKLNSFYLADCPELESFPRGGLPADLRLLEIQNCPKLIASRMEWGLFQLNSLKFFKVSDHEFENVDSFPEENLLPPTLVSLSLTNCSKLKIMNYKGFLHLKSLKDLMILNCPSLERLPEEGLPSSISRLRISDCPLIKEKYEKEGGVRIALA* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4080 1178 Pfam Rx N-terminal domain 32 92 IPR041118 -
Tpr2g4080 1178 Gene3D Ribonuclease Inhibitor 887 1048 IPR032675 -
Tpr2g4080 1178 Gene3D Ribonuclease Inhibitor 1049 1169 IPR032675 -
Tpr2g4080 1178 PANTHER OS05G0414200 PROTEIN 19 866 - -
Tpr2g4080 1178 SMART LRR_typ_2 632 655 IPR003591 -
Tpr2g4080 1178 SMART LRR_typ_2 766 789 IPR003591 -
Tpr2g4080 1178 SMART LRR_typ_2 585 608 IPR003591 -
Tpr2g4080 1178 Gene3D - 314 399 IPR042197 -
Tpr2g4080 1178 Gene3D - 400 489 IPR036388 -
Tpr2g4080 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 414 IPR027417 -
Tpr2g4080 1178 SUPERFAMILY L domain-like 477 881 - -
Tpr2g4080 1178 PANTHER DISEASE RESISTANCE PROTEIN RP 19 866 IPR044974 GO:0006952
Tpr2g4080 1178 Pfam NB-ARC domain 163 380 IPR002182 GO:0043531
Tpr2g4080 1178 Coils Coil 35 55 - -
Tpr2g4080 1178 Gene3D - 143 310 IPR027417 -
Tpr2g4080 1178 Gene3D Ribonuclease Inhibitor 514 886 IPR032675 -
Tpr2g4080 1178 Gene3D - 30 116 - -
Tpr2g4080 1178 PRINTS Disease resistance protein signature 184 199 - -
Tpr2g4080 1178 PRINTS Disease resistance protein signature 256 270 - -
Tpr2g4080 1178 PRINTS Disease resistance protein signature 351 365 - -
Tpr2g4080 1178 PRINTS Disease resistance protein signature 864 880 - -
Tpr2g4080 1178 SUPERFAMILY L domain-like 907 1163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4080 Tpr-Chr2 43367818 43377194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4080 565 700 WRKY Transcription Factor Family AT4G12020 33.333 5.49e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4080 - - mtr:MTR_7g021000 1417.91