Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4069 ATGGCATCAATATCCTTATCTTCCTTTACATATGGATGGAAGTATGACGTGTTTCTAAGCTTCAGAGGTCAAGATATTCGGCATGGTTTTATTGGCTATCTGTACAAAGCCCTGTCTGGTAGGGGAATTCACACCTTCATTGATGATGAGGAACTTCAAAGAGGGGAACATATTATGCCATCACTTGTCAAGGCAATTACAGAGACAAGAATTGCGATCCCTGTGTTCTCTAAGAACTATGCTTTTTCGTCATTTTGTTTAGATGAACTTGTTAACATCCTTTCCTTGGTTAAGGAGAAGGGTCGGTTGGTTTTGCCGGTTTTCTATGACGTGGATCCTTCTGATGTGAGACATCAGAGAGGTAGTTATCAAGAAGCACTGGCTAGACAAGAGAAAAGATTCCAAAATGACAAGGAGAAGGTGCAAAAATGGAGGATAGCTTTGTGTCAAGCAGCTGATTTGTCTGGCTATCATTTCAAACATGGGAATGAGAATGAATGCGAGTTTATAGAGAAGATTATTGAAGAGATCTCCAACGTTATTAATCGGGATCCTTTGCATATTGCGGATTATCCTGTGGGATTGGAGTCTCGGGTGCTAAAAGTAACCTCGCTTTTAGATGGCAGATCTGATGGAGTCTGCATGGTAGGAATCCATGGTATTGGTGGAATTGGTAAAACAACAGTAGCTCGAGCTGTTTATAATTTTATTGCTGATCAATTTGAAGGTTTGTGTTTTCTTGAAAATGTAAGGGAAAATTCAATTAAACACGGTTTAGTGCATCTCCAAGAGACACTTCTTTATGATATTCTTGGAAAGAAGGATATTAAGTTAGGAAGTGTCTATAAAGGAATTCCAGTAATAAAGCATAGGCTTCACCGAAAGAAGGTTCTTTTGGTTCTTGATGATGTTGACAAACTAGATCAGTTGAAGGCAATAGTTGGAGAGTCTAGTTGGTTTGGTCGTGGCAGCAGAGTAATCATTACAACTCGGGACAAGCATTTGTTAACAAGTCACGGGGTTGAAAAAACATATGAGGTAGATGGGTTGAATATGAACGAAGCACTCGAGTTGATTTGCTGGAATGCTTTTAAAACTGACAAAGTTGATTCAAATTATGAGAATGTTTTAAATCGTGCAGTGAGTTACGCTTCTGGTCTTCCATTGGCTTTGGAGGTAATGGGTTCCTACTTGGTTAGAAAAAGTATAAAAGAATGGGAATCAGCAATAGATCAGTTTGAAAGAATTCCTGATGAAAAAATCCACAACATACTTAAAGTTAGTTTTGTTTGTTTGTCAGAAGACCAGCAAAAAATATTTCTTGATATTGCTTGTTTCTTCAAAGGATATGATTTGTCATACGTCAAAAAAATACTTCAGATTCATCATGGTATCTGCCCAGAATATGGTATTGGAGTGCTGATAGAAAAATCTCTCATAAAGATAACTTTGAATGGTCGTGTAATACTGCACGATTTAATAGAGGACATGGGCAAAGAAATTGTTCGACAAGAATCACCGGAGGAGCCTGGAAAACGTAGTAGGTTATGGTTTCATGAGGATATAATTCATGTTTTTGAAGAAAATACTGGAACTAGCAGTATTCAAGTCATAATTCTGGATTTCCCCAATTTTGAAGAAGTAGTAGAATGGGATGGAAAGGCATTCAAGGAGATGAAAAACCTCAAAACTCTTATTATTAGAGTTGGTGGTTTTTCCAGAGGTCCTGACCATCTTCCAAATAGTTTAAGAGTATTGGAATGGTGGGGATATCCATCGCCATCATTACCTTCCAACTTTCATCCGAAGAAACTCGTGATATTGGAGTTGCCGCAAAGTTGCTTAATGTCACTTGACTTGCTTATACCAAAAAAGAAGTTTGTGAACATGAGAGTTTTGAATTTTGATGATTGTGAGTTTATAACAGAGATACCTGATGTGTCTGGTGCTCCAAATTTAGAAGAATTGTCATTTGGTGATTGCAAAAATTTAATTAAAATTCATGAATCAGTTGGATTCTTGAATAAACTTAAAATGTTGAATGCTGATGGCTGTAGCCGGCTTGGGACTTTTCCACCCATAAAGTTGAGCTCTCTTGAAAAACTCAAGCTTTCATCTTGTCACAGTCTCAAGAGTTTTCCAGAAATATTAGGAAAGATGGAACATATAACAGTACTTGATTTACTGGACACTCCGATAAAAGAACTTCCATTTACAATTCACAATCTTACTCGGCTTGAAAGAGTGGTACTGATTGGCTGTGGAATTGTTCAGTTACCAAGTAGTATTTTTGGGATGCCGGAACTTCATGAGTTGATTGCCGGGGAATGTACAATGCTATTACCAAAACAGGACAATTTTGAAGCCCAAGCAAGCTCAATGGTCTTAAATTTAGGGCTTTCAGGCTGCCATGTATCAGACGATTTCCTTCGAATTGGTCTCCCTTTGTTTTCTAATATCAAAGAGCTGTACCTGTCTCAGAATGAATTTACAACTCTTCCTGCATGCATCAAAGATTGTTACTTTCTAACCAAAATTCATTTGGATGGTTGCAAGAATCTCAAAAAAATTTGTGGGGTTCCACTGAACTTGGAAACATTATCTGCAAAATGGTGCACATCCTTGAAAAATTTAGACCTCACACTTCTTCCTAAATGCGTCAAATTATGTCACTTTTTGAAGACACTTATTTTGGATAACTGCAAGAATCTTAAAAAAATTAGAGGTGTTCCACCCAACATAAGAACTTTGTCTGCAAGAGACTGCCCTTCCTTGAATTTCTGGTGTAGAAGTGTGTTACAGAATGAGAAATTGCACGCGGAGGGCGGCGACAAGGAGTTTCACTTGCCAGAAACCTGTATTCCAATGTGGTTCACGCACCACATCTATGGTCATGATGCATCAATTACTTTCTGGTTTCGTAAAAAGGTCCCTGCAATATCTCTATGTCTTGTTGTTCGACCCGGAACATATGAAGAAATTATTCAGCCCAGATTTATCATCAATGGAGATAGAAAAACAGATGTATGTGAGAAAAATATCTATGATGGTGACCGTGTGTGCAACAGAGTAGTGGATCATATAATTATTTTTGATATAAAGTCAATACCAATTAAATTAACTGATGTTATTTTCGAAAGCGAATGGAATCATGTGTTGTGTACACTATCTGGTTTGCGAAACAAACTTTTCATTGATGAAATTGGAATCAGAGTATTCAAACAAGGAATCAACATGGAAGACATCCGATTCACCAATCCACATTTGCTGAAAGATAAGTATAGATCGATATACAATAGAGTTTTGCACGGACAACCTATGATGCATGTTGAAGCTTCTTTGGATAAATTACTCCGTTTACTGCCCTACCGTTATTTCTATTATTTAGCGGAGTATGGACACAGTATTTTTGTTCTTTATTTGTGCTTTATTTTCCTGGATATAGTTTCTAAGTGTATTGAAGATTTTGAATATTATATTATTCCGTCATGTAGATTACTTTGCTCTATTTTTCTACTATATTATTTGATATTTAAATCTTCACTTTAG 3549 0.3694 MASISLSSFTYGWKYDVFLSFRGQDIRHGFIGYLYKALSGRGIHTFIDDEELQRGEHIMPSLVKAITETRIAIPVFSKNYAFSSFCLDELVNILSLVKEKGRLVLPVFYDVDPSDVRHQRGSYQEALARQEKRFQNDKEKVQKWRIALCQAADLSGYHFKHGNENECEFIEKIIEEISNVINRDPLHIADYPVGLESRVLKVTSLLDGRSDGVCMVGIHGIGGIGKTTVARAVYNFIADQFEGLCFLENVRENSIKHGLVHLQETLLYDILGKKDIKLGSVYKGIPVIKHRLHRKKVLLVLDDVDKLDQLKAIVGESSWFGRGSRVIITTRDKHLLTSHGVEKTYEVDGLNMNEALELICWNAFKTDKVDSNYENVLNRAVSYASGLPLALEVMGSYLVRKSIKEWESAIDQFERIPDEKIHNILKVSFVCLSEDQQKIFLDIACFFKGYDLSYVKKILQIHHGICPEYGIGVLIEKSLIKITLNGRVILHDLIEDMGKEIVRQESPEEPGKRSRLWFHEDIIHVFEENTGTSSIQVIILDFPNFEEVVEWDGKAFKEMKNLKTLIIRVGGFSRGPDHLPNSLRVLEWWGYPSPSLPSNFHPKKLVILELPQSCLMSLDLLIPKKKFVNMRVLNFDDCEFITEIPDVSGAPNLEELSFGDCKNLIKIHESVGFLNKLKMLNADGCSRLGTFPPIKLSSLEKLKLSSCHSLKSFPEILGKMEHITVLDLLDTPIKELPFTIHNLTRLERVVLIGCGIVQLPSSIFGMPELHELIAGECTMLLPKQDNFEAQASSMVLNLGLSGCHVSDDFLRIGLPLFSNIKELYLSQNEFTTLPACIKDCYFLTKIHLDGCKNLKKICGVPLNLETLSAKWCTSLKNLDLTLLPKCVKLCHFLKTLILDNCKNLKKIRGVPPNIRTLSARDCPSLNFWCRSVLQNEKLHAEGGDKEFHLPETCIPMWFTHHIYGHDASITFWFRKKVPAISLCLVVRPGTYEEIIQPRFIINGDRKTDVCEKNIYDGDRVCNRVVDHIIIFDIKSIPIKLTDVIFESEWNHVLCTLSGLRNKLFIDEIGIRVFKQGINMEDIRFTNPHLLKDKYRSIYNRVLHGQPMMHVEASLDKLLRLLPYRYFYYLAEYGHSIFVLYLCFIFLDIVSKCIEDFEYYIIPSCRLLCSIFLLYYLIFKSSL* 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4069 1182 Gene3D - 186 343 IPR027417 -
Tpr2g4069 1182 SMART till_3 14 154 IPR000157 GO:0007165
Tpr2g4069 1182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 443 IPR027417 -
Tpr2g4069 1182 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Tpr2g4069 1182 PANTHER ARCHAEAL ATPASE 25 877 - -
Tpr2g4069 1182 PANTHER ARCHAEAL ATPASE 870 1052 - -
Tpr2g4069 1182 SUPERFAMILY L domain-like 503 929 - -
Tpr2g4069 1182 Gene3D - 349 432 IPR042197 -
Tpr2g4069 1182 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Tpr2g4069 1182 PRINTS Disease resistance protein signature 215 230 - -
Tpr2g4069 1182 PRINTS Disease resistance protein signature 291 305 - -
Tpr2g4069 1182 PRINTS Disease resistance protein signature 384 398 - -
Tpr2g4069 1182 PRINTS Disease resistance protein signature 694 710 - -
Tpr2g4069 1182 Gene3D - 10 185 IPR035897 -
Tpr2g4069 1182 Gene3D Ribonuclease Inhibitor 713 939 IPR032675 -
Tpr2g4069 1182 Gene3D Ribonuclease Inhibitor 522 712 IPR032675 -
Tpr2g4069 1182 Pfam NB-ARC domain 199 419 IPR002182 GO:0043531
Tpr2g4069 1182 Pfam TIR domain 14 179 IPR000157 GO:0007165
Tpr2g4069 1182 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 870 1052 IPR044974 GO:0006952
Tpr2g4069 1182 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 877 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4069 Tpr-Chr2 43233649 43238831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4069 9 780 WRKY Transcription Factor Family AT4G12020 30.303 3.48e-83 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4069 - - gmx:121173697 1237.25