Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4042 ATGTTCACATCAAGGAAGAAAATCAGCAAAGATAAGGGTGCTGAACCAACTGAATTCGAGGAATCCGTTGGACAGGCTTTGTTTGATCTAGAAAATACCAACAATGAGCTGAAAAGTGAGCTCAAAGATTTATACATAAATTCAGCAGTGCAAATCGATGTTTCTGCCAACCGTAAGGCTGTGCTTATCCAAGTCCCATACAGATTGAGGAAGGGTTTCCGCAAAATTCATGTTAGGCTTGTTAGGGAGCTCGAGAAGAAATTTAGCGGAAAGGACGTAATCGTGATTGCCACCAGGAGGATTGTTAGGCCACCAAAGAAAGGTTCTGCTGCTCAGCGCCCCCGCAGCCGTACACTTACTGCTGTGCATGAAGCAATTCTTGAGGATCTCGTGTTACCTGCTGAGATTGTTGGGAAGCGTACTCGTTACAGAGTTGATGGATCAAAGATCATGAAGGTGTTTTTGGACCCAAAGGAGCGTAACAATACCGAATACAAGTTGGAGACGTTTACTGCAGTTTACAGGAAACTATCTGGAAAAGATGTTGTGTTTGAGTATCCAATTACTGAGGCTTAG 576 0.4358 MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNNELKSELKDLYINSAVQIDVSANRKAVLIQVPYRLRKGFRKIHVRLVRELEKKFSGKDVIVIATRRIVRPPKKGSAAQRPRSRTLTAVHEAILEDLVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLETFTAVYRKLSGKDVVFEYPITEA* 192
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4042 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Tpr2g4042 191 Coils Coil 27 47 - -
Tpr2g4042 191 MobiDBLite consensus disorder prediction 1 20 - -
Tpr2g4042 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Tpr2g4042 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Tpr2g4042 191 MobiDBLite consensus disorder prediction 1 18 - -
Tpr2g4042 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr2g4042 Tpr-Chr2 42723549 42725609 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4042 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 79.058 8.22e-115 323
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4042 K02993 - gmx:100527642 346.665