Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4029 ATGAGGCTTGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCACAGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCTCAGGGGAGGCCAATGGTCAGAATTCTATGAATGAGGGTAATGTACACTCTCTTAATAGCAGAGCTTGTGAAAACTTGCAGCATGCTGTCAGTGAAACAAGTAATATGCTCTGTGTTAATTCAAGTCACGATTCTCTATCCGAAAATGCTGAGAGTAAGCAGATCTTGTTGAATAAGACTCAGGATCCCAACCATTTAGAAGGTCATGATGAGAACACATCCTGTATTAGTAGAGCATCTGATGCTAATTTAGTGAATGATAGCCATCTAAGGAACGCAGACAGAATAAATATACCTCGAAATGGTAAATCTCTCTCGGATAGTCGAAGCTCTATTGAGAATTGCAGTTCATCATTAACCAAAGAGAGTACACCTGTTGTTATTTCTGGTGACAAATGTGCTGCCAATAAGGATACCCTTATTGAAGGCACTTCCAATGCTTCACTAAAAGTATGTCCAAAGTCACAAGCAGATCCTGATAATGATGTACATGATGCTAAAGTTGAAGACTGTAAATATCCGGTCCCTGATGGACATCATGAGAAAGCTGAAGAACTGGTGAAATCACCTGGGAAGCAGGAATCTCAATCTGAAACTGAAAGTGATGAATCAGATGTTGTGGAACATGATGTGAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTTGTAGGTGCACTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAAAAACTCCCTGAAGGGGATTGGTTCTGTGAAGAATGCCAAGATGCAGTGGAAGCTGAAAAGAAGAGGCTGGATGTTGAAGAAAAAAAAATCGTCAAAACTACTTCGACGTCACAAGTTTCTGGCAAAAGACTTCGTGACAACATTGAAGTGGCTCCTCCAGCGGCAAAAAGGCAAGCTCTTGAATTAAGCAAAGGATCACCAAAGGTGTCAAGCCCCAAGAGATTGGTGCCACTGTCACGAGAATCTTCATTTAAGAGCTCAGATAAATTAAAAGGGAAGTCCGGTCTTCTGATGCCTCCTCGTAACCACTCTGGTGGTGATGACACACAGACTACTCGATCTTCTTCCCTTGGCCCCCGGGGTCAAATTTCAAAAAGTATGTTGTTGAAGTCTAATTCATCCAACAACTTAAGTTCCAAGCCGAGAGTCAAAATTGTCGATGAAGTTTTTCCACCAAGACCAAAGGGTAATGAACAAACTTCTAAGAATATGGAGATACCTGGTCGGATGACAAGCAGATCGACATTATTCAAATCCTCTAGTTTGGGCCGATCAAGTGCAATTGAATCAAAAGTCAAAATGATTTCACCTAAATCTGCAACTACTCACGACTTGAAAGGGTTTCGACATTTCAAAGAATCAGGTGTTTTTGACCGAAAATATTTGTCTAGGAATGACCGGCCTGTGGCTAGTTCTGTTGTTTCCACACCTAAGGGTGACCAGAAGCTTACACCTCGGGCTGAAACCATTATTAAATCGTCATCTGTTAATAATCGTGAGGTGAAGGTTAACCAGGATGGAAAATTAAGTGCGTCATTAAAATCAATGAACAATATAAGCCGTAAAAATTTGGAGCCTCAAGGCAGTTCAGAGAGAACATCAGCCAATAATGATGAAGCTCTACAGGATGCGCTGCCTCGATCACGAGAGACAGGAAATCAGGGTGAGAAATCCAGAGAGAGTCTTAGTAATCGTGCAAGGCCAGTTGTTCCCACTGCATCAAAAAGTCCATTCTGTCAAAAATGTGAGGAATTTGGCCATTCTTTAGAATATTGCACAGCTAGTTCTCTACCAGAATCTGGTGCAGAAATATTCGCCACATTCTCAAATATCTCAAAAGAGGAAACACATAAAGACATTGGATTGAAAGCTGCAATCCAGGCTGCTTTACTTAAAAGGCCTGTAATTTACAGGAAGAAAGAAGTATCCAGTCAAACTGATGAAATTTCTACATCAGGCACAGAATTGAATTGCGAAGTGACTGCACAAGACCCAGTCTTGGTTTCTAACACACTTAAGAATAGTATTACTACTGAAGAAACTAATGAACAACAAAAAGTCCTTGAGAATTCTACATCTGCCAGCGATTTGAAGCAACTTAACTCTTGTTCAATTGGTCTTTGTTCCCAACAAGGAAAGTCGGATTTAGTCGGTCTTAATGCTCAAAAACCTTTAGTGAGAGACTTGTCTACAAATGCTGTGGAAATCTCAAGTGTTCTATCGAAGATGTTGGCCTTTCCTGAATTTGATTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCAGAATTATGTACTGGAGTTCAGGCACATTTATCCTCTTCTGCATCTCCTAAGGTACTTGAGGTAGTGACCAAGTTTAGTTCTGAAGTTCCCCTCAATGAAGTTTCTCGCTTGAGCACATGGCCATCACAGTTTCATCGTGGTGGTGCTAGAGTAGATAATATTGCTCTTTACTTCTTTGCCAGAGATGTTGAGAGCTATGAGAGACACTACAGGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAGTTTTTGATGGTGTTGAACTTCTCATTTTCCCATCCAATCAGCTTCCGGAAAATTCACAGCGCTGGAATATGCTGCTTTTCTTATGGGGTGTATTTAGGGGGCAGAGGACCAATCATTCAGGTTCTGCAAAAAAGATATGTACTCCAAGTTTGAATGCACTGCCAGTTGAGGTGAATTCTTCAACTGCTGTTGTGACTTTGTCTGAACGTTGTTTGTCGAAGGGCATCGGTGAAAAATCAATTAATTCCGACAAAGCATGCAACCAATTATGTCAACAAACGAAATCCACTGGTTCGCCCCTGAAAGCTAGTGTACTAGAGGGTGAACAGTACAGAGAGTCTAAACCTCTTGAAGAAATGGGAGCAGGTGCAAGTAACAAGATGGTGGAAGCAAATACTGATTCTACTATTTCTGACATGCAAGAGAATACCTTCTGTTTGGAGATTCCTTCTGTTAGCAATCAAGAAACAGATGCTGCCTACAATATTAGTAAGAATGAAATTTTGAAGAGAGTGGATAGAGTGAACTGTGATGAAGATCAGCAAAGGACTAAGAGGAAACAGAAAGAAGACCGTCATTATCTTGATTTGGAGAAAACTATTGACAATCACGAACCACATGCTGCAAGCTATATTGGTATGTATAAAACTTCAGAGAGAATGAACATTGATCAAGATCAGCAAAGGCATCAGAGGAAACAGAGAGATGGTAACTATATTGACTTGGAGGCAACTGTTGAAATTCAAGAACCAGCTGCTGCAATCAATATAACTAAGGATAACCTTCCAGAGAAAATGGAAGATGATAAAGATCGGCAATGGCTTAAGAGGAAAGGCAAAGAAGATTATCACTATATTGACTTGGAGGCACCTCTTCTGGAAGACTTGGAGGCACCTTTTCTGGAAGACTTGTCCGCAGAAGGGGTCGAGTACCAGCTACCCAATGATAAAGAAGTTCCTCATGTTGACTTATCAGTAGTTGGTTGTCAGAAAATGCCTTGGAATGAGGTAAATGGAAAATTAGAAGATGGAGAAAGTTCCAGAAAGAAGCTTAGGACAAGTATTGGCGGGATTTATGGACATTACAGTTCTGGAGGTAGAGACTCCTTTAATGACAGTTTGACATCTCTTGGAAATGATCTTGCTTCTCGTTCTTCAGTTGAGGACAAAGGATGTGAAGAAGCTTCCGATGAAAAAATCATCTGCGAGGACTTGGGAAAGAAGATGGAAAGAACGTTCTTTCCTGTTGATTCTCAGAATATCAATGGCCCACAATTGGGGCTAAATGCCATGCCATTGAAAGGGATTCTTGAGCGTGTGGATGTGATTCCAAATCTAAATCTTGCTTTAGGGGATGAAACAGAACTGCTGTCACCCCCTCCTCCTCCTCCTCCGGCTGCTCCGAAGGGTATGCTGCCTCCTTTCCTAGTTGGGGCAGTAGACAAGAAAGATAACCGTTCAGATAGTTTGGCAGATGGGCTAGAGGATGATGCTTCCGCTGCCGCTGCATCTCTTTCCCTTTCTCTATCGTTTCCATCTTCAAGCAAGGAACACACAAAAGATTCTTCAACGGCAGAGCTTTTGCCTGATGGGCAACGTGTGAATCCATCGTTTCTCCTCTTCGGGAGATACACAGACAAATAA 4338 0.4172 MRLESGTCNVCSAPCSSCMHLNHALTGSKAEEFSDENCRSGEANGQNSMNEGNVHSLNSRACENLQHAVSETSNMLCVNSSHDSLSENAESKQILLNKTQDPNHLEGHDENTSCISRASDANLVNDSHLRNADRINIPRNGKSLSDSRSSIENCSSSLTKESTPVVISGDKCAANKDTLIEGTSNASLKVCPKSQADPDNDVHDAKVEDCKYPVPDGHHEKAEELVKSPGKQESQSETESDESDVVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWFCEECQDAVEAEKKRLDVEEKKIVKTTSTSQVSGKRLRDNIEVAPPAAKRQALELSKGSPKVSSPKRLVPLSRESSFKSSDKLKGKSGLLMPPRNHSGGDDTQTTRSSSLGPRGQISKSMLLKSNSSNNLSSKPRVKIVDEVFPPRPKGNEQTSKNMEIPGRMTSRSTLFKSSSLGRSSAIESKVKMISPKSATTHDLKGFRHFKESGVFDRKYLSRNDRPVASSVVSTPKGDQKLTPRAETIIKSSSVNNREVKVNQDGKLSASLKSMNNISRKNLEPQGSSERTSANNDEALQDALPRSRETGNQGEKSRESLSNRARPVVPTASKSPFCQKCEEFGHSLEYCTASSLPESGAEIFATFSNISKEETHKDIGLKAAIQAALLKRPVIYRKKEVSSQTDEISTSGTELNCEVTAQDPVLVSNTLKNSITTEETNEQQKVLENSTSASDLKQLNSCSIGLCSQQGKSDLVGLNAQKPLVRDLSTNAVEISSVLSKMLAFPEFDYIWQGVFEVHRNGKPPELCTGVQAHLSSSASPKVLEVVTKFSSEVPLNEVSRLSTWPSQFHRGGARVDNIALYFFARDVESYERHYRGLLDHMIRNDLALKGVFDGVELLIFPSNQLPENSQRWNMLLFLWGVFRGQRTNHSGSAKKICTPSLNALPVEVNSSTAVVTLSERCLSKGIGEKSINSDKACNQLCQQTKSTGSPLKASVLEGEQYRESKPLEEMGAGASNKMVEANTDSTISDMQENTFCLEIPSVSNQETDAAYNISKNEILKRVDRVNCDEDQQRTKRKQKEDRHYLDLEKTIDNHEPHAASYIGMYKTSERMNIDQDQQRHQRKQRDGNYIDLEATVEIQEPAAAINITKDNLPEKMEDDKDRQWLKRKGKEDYHYIDLEAPLLEDLEAPFLEDLSAEGVEYQLPNDKEVPHVDLSVVGCQKMPWNEVNGKLEDGESSRKKLRTSIGGIYGHYSSGGRDSFNDSLTSLGNDLASRSSVEDKGCEEASDEKIICEDLGKKMERTFFPVDSQNINGPQLGLNAMPLKGILERVDVIPNLNLALGDETELLSPPPPPPPAAPKGMLPPFLVGAVDKKDNRSDSLADGLEDDASAAAASLSLSLSFPSSSKEHTKDSSTAELLPDGQRVNPSFLLFGRYTDK* 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4029 1445 MobiDBLite consensus disorder prediction 1408 1428 - -
Tpr2g4029 1445 MobiDBLite consensus disorder prediction 533 595 - -
Tpr2g4029 1445 PANTHER - 1 988 - -
Tpr2g4029 1445 PANTHER - 988 1436 - -
Tpr2g4029 1445 Coils Coil 295 315 - -
Tpr2g4029 1445 MobiDBLite consensus disorder prediction 221 238 - -
Tpr2g4029 1445 MobiDBLite consensus disorder prediction 221 244 - -
Tpr2g4029 1445 SUPERFAMILY FYVE/PHD zinc finger 239 302 IPR011011 -
Tpr2g4029 1445 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 988 1436 - -
Tpr2g4029 1445 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 988 - -
Tpr2g4029 1445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 314 IPR013083 -
Tpr2g4029 1445 MobiDBLite consensus disorder prediction 512 616 - -
Tpr2g4029 1445 MobiDBLite consensus disorder prediction 390 426 - -
Tpr2g4029 1445 MobiDBLite consensus disorder prediction 320 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4029 Tpr-Chr2 42649198 42660742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4029 249 336 C2H2 Transcription Factor Family AT3G01460 30.682 6.03e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4029 - - gmx:100806639 1676.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4029 2 42649198 42660742 Tpr2g4029 2 42649198 42660742 ECH