Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4027 ATGGTGAATGGAGGAGGTGCTGTTAGGGTGAGAAATTTGAATGAAGAAGAAATCAAGTGGCCACCATGGTTGCAACCACTTCTCCAAACTAGCTTCTTTGTTCAATGCAAAGTGCATGCAGATTCCAACAAAAGTGAATGCAATATGTATTGTTTGGATTGTATCAATGGAGCCCTTTGCTCTGCATGTTTGGCTTCTCATAAAGGACATAATGCTATTCAGATAAGAAGGTCTTCATATCATGATGTGATAAGGGTATCTGAGATACAGAAATGTTTGGACATAACAGGGGTTCAAACATATGTTATAAATAGCGCAAAGATTGTGTTCTTGAATGAAAGACCTCAACCTAGGCCTGGCAAAGGAGTCACCAATACTTGCGATGTATGTGAAAGAAGCCTTCTTGATTCCTTCTCCTACTGTTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAATTCCAGAAGAAAAAAAACTTAGGTGAGAGAGATGGATCAGATGGTGAAGAGAGAGATGGATCAGATGGTGAAGAATCAAGCAGTAATGGAAATGACAGAAACATAAACAAAATCCAAAGCTTCACACCATCAACACCACCACCTTACAGAATAGCTAAGAGGAGGAAGGGGATTCCACATAGAGCTCCAATGGGAGGACACCTTATTATATAG 672 0.4018 MVNGGGAVRVRNLNEEEIKWPPWLQPLLQTSFFVQCKVHADSNKSECNMYCLDCINGALCSACLASHKGHNAIQIRRSSYHDVIRVSEIQKCLDITGVQTYVINSAKIVFLNERPQPRPGKGVTNTCDVCERSLLDSFSYCSLGCKIVGTSKKFQKKKNLGERDGSDGEERDGSDGEESSSNGNDRNINKIQSFTPSTPPPYRIAKRRKGIPHRAPMGGHLII* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4027 223 MobiDBLite consensus disorder prediction 156 223 - -
Tpr2g4027 223 MobiDBLite consensus disorder prediction 180 199 - -
Tpr2g4027 223 Pfam PLATZ transcription factor 76 147 IPR006734 -
Tpr2g4027 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 219 - -
Tpr2g4027 223 MobiDBLite consensus disorder prediction 156 179 - -
Tpr2g4027 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4027 Tpr-Chr2 42636799 42640247 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr2g4027 PLATZ 8.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4027 - - gmx:100796834 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3484 3 38518937 38521432 Tpr2g4027 2 42636799 42640247 ECH
Tpr2g4027 2 42636799 42640247 Tpr2g4027 2 42636799 42640247 ECH