Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4014 ATGTTGTCATTAGCTCCTTCCATTGATTCCAAACAAACTACTACCGCAGAAGTCTCTGCAGATTCTGTAGTAACTAACCAACAAAAACAAAAACCCTCTGATGATTATTATGATTCTACTAATCATACATTTAAATCTAAATTACCAGATATACCAATATCTAACCACCTCCCACTTCACACCTACTGCTTCGAAAAACTTCCCGAAATCTCCGATCGTCCTTGTCTCATCGTCGCCTCCACCGGAAAAACATACACATATGCAGAAACTTATCTCCAATGTCGAAAAATCGCAGCCGGCTTATCCAAATTAGGAATCCAAAAAGGCGATGTAATCATGATTCTCCTCCAAAATTCAGCTGAATTTGTTCTCTCCTTCCTCGCCGCCTCCATGATCGGTGCAGTCACCACCACCGCTAATCCTTTCTACACCAGCGCCGAGATCTTCAGACAAATAACTGCTTCCAAAACAAAGCTGATTATCACACAAGCAATGTACGTTGGTAAATTGAAGCAGAACGAGGAGAAAGATGACTTAATTGATTTCAAGATAATCACAGTCGATGAACCACCGGTGAATTGTTTACATTTCTCGGTGATTTCTGAAGTAAATGAAGATCAATTGCCGGAAGTTGAATTTGATCCGGAAGACGCGGTGGCGCTTCCGTTTTCTTCCGGCACCACCGGAGTACCTAAAGGAGTAATTCTAACACACAAAAGCTTAACAACAAGCGTTGCTCAACAAGTTGATGGAGAGAATCCAAATATATATTTAACAACTGAAGATGTTCTTCTTTGCGTTCTTCCATTGTTTCATATATATGCGCTCAGCACTGTGCTATTGTGCGCACTGAGAGCAGGGAGTGCTGTTCTGTTAATTCATAAATTTGAGATCAGAACGTTGCTCGGTCTTATACAGAAACATAAAGTGACGGTGGCGATGGTTGTTCCGCCGTTAGTTTTGGCGTTAGTGAAGAATCCTATGGTGGCGGAGTTTGATCTTAGTTCGATACGGTTGGTGCGTTCAGGAGCTGCACCATTAGGGAAGGAGCTTGAAGAAATGCTTCATAACCGAATTCCTCAAGCCGTTTTTGGACAGGGATACGGTATGACAGAGGCAGGCTCAGTACTGTCCATGTCTTTGGGTTTTGCAAAGCATCCATTGCCAGTAAGCTCAGGTTCGTGTGGAACTGTTGTAAGAAATGCAGAGCTCAAAGTTATTAACCCTGAAAATGGTCGTTCTCTTGGTTATAATCAACCTGGTGAAATTTGTATCAGAGGCCAACAAATTATGAAAGGATATTTGAATGATGAGAATGCAACAAAAACTACTATTGATGAGGAGGGTTGGCTTCATACTGGTGATGTTGGCTATATAGATGACAATGATGAGATTTTCATTGTTGACAGGGTGAAGGAACTCATCAAATTCAAAGGCTTCCAAGTGCCCCCTGCTGAACTTGAAGGCCTTCTTGTAAGCCATCCATCTATTGCAGATGCAGCTGTCGTCCCGCAAAAAGATGTTGTTGCTGGTGAAGTTCCTGTTGCCTTTGTGGTAAGATCAAATGGACTTGATCTAACTGAAGAAGCTGTAAAGGAGTTCATAGCGAAACAGGTTGTGTTTTATAAGAGACTGCACAAAGTTTATTTCATTCATGCAATTCCCAAGTCTCCATCAGCAAAGATACTGAGGAAAGACCTCAGAGCAAAGTTATAA 1716 0.4172 MLSLAPSIDSKQTTTAEVSADSVVTNQQKQKPSDDYYDSTNHTFKSKLPDIPISNHLPLHTYCFEKLPEISDRPCLIVASTGKTYTYAETYLQCRKIAAGLSKLGIQKGDVIMILLQNSAEFVLSFLAASMIGAVTTTANPFYTSAEIFRQITASKTKLIITQAMYVGKLKQNEEKDDLIDFKIITVDEPPVNCLHFSVISEVNEDQLPEVEFDPEDAVALPFSSGTTGVPKGVILTHKSLTTSVAQQVDGENPNIYLTTEDVLLCVLPLFHIYALSTVLLCALRAGSAVLLIHKFEIRTLLGLIQKHKVTVAMVVPPLVLALVKNPMVAEFDLSSIRLVRSGAAPLGKELEEMLHNRIPQAVFGQGYGMTEAGSVLSMSLGFAKHPLPVSSGSCGTVVRNAELKVINPENGRSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVVAGEVPVAFVVRSNGLDLTEEAVKEFIAKQVVFYKRLHKVYFIHAIPKSPSAKILRKDLRAKL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4014 571 Gene3D - 35 471 IPR042099 -
Tpr2g4014 571 PANTHER 4-COUMARATE--COA LIGASE 3 43 570 - -
Tpr2g4014 571 CDD 4CL 53 567 - -
Tpr2g4014 571 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 43 570 - -
Tpr2g4014 571 Pfam AMP-binding enzyme 72 477 IPR000873 -
Tpr2g4014 571 SUPERFAMILY Acetyl-CoA synthetase-like 54 570 - -
Tpr2g4014 571 Pfam AMP-binding enzyme C-terminal domain 486 561 IPR025110 -
Tpr2g4014 571 Gene3D - 472 571 IPR045851 -
Tpr2g4014 571 MobiDBLite consensus disorder prediction 16 34 - -
Tpr2g4014 571 MobiDBLite consensus disorder prediction 16 36 - -
Tpr2g4014 571 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4014 Tpr-Chr2 42536256 42539320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4014 40 484 Monolignol Biosynthesis Gene Families AT1G65060 69.265 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4014 K01904 - gmx:547492 876.7