Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4012 ATGGTTTTAAACGTGGCCGTACCTCTCACCTCTTCTTCTCTTCTTCTTAAACTTATAACTATCATTCACTACTTTCCACCTAACCCCTTTTATATAGTTAGCCCTTTGGTTTTTCTTTCTTCACCCGCCAATCCCCTCACTTCCAATTTTCTCTCCCTTATATTATATATCTCATTTTCCTCTCTTCATTTTCCCAACCTACTTTCTTCTCATCCAAATAAATACAATATCATATATCTCATTCATAACAAAATGTTGTCATTAGCTCCTTCTATTGATGCTAAACAAACCACTACTACAGAAGTCTCTACAGATTCTGTTGTGATTAACCAACAAAAACAAAAACCCTCTCATGATGATTATGATTCTACTAATCATATTTTTAAATCTAAATTACCAGATATACCAATATCTAACCACCTCCCACTTCACACCTACTGCTTCCAAAAACTTCCTGAAATCTCCGATCGACCTTGTCTCATCGTCGCTTCCACCGGAAAAACATACACATATGCAGAAACTTATCTCCAATGTCGAAAAATCGCGGCCGGTTTATCCAAATTAGGAATCCAAAAAGGAGATGTAATCATGATTCTACTTCAAAATTCAGCTGAATTTGTTCTCTCCTTCCTCGCCGCCTCCATGATCGGTGCAGTTGCCACCACTGCTAATCCTTTCTACACCAGCGCCGAGATCTTCAAACAAATAGCTGTTTCCAAGACGAAGCTGATTATCACACAAGCAATGTACGTTGATAAACTGAAACAGAACGAAGAGAAGTATGAATCAATTGATTTCAAGATAATCACTATTGATGAACCGCCGGTGAATTGTTTACATTTCTCGGTGATTTCTGAAGCAAACGAAGATCAATTACCGGAAGTTGAATTCGATCCAGAAGACGCGGTGGCGCTTCCATTTTCTTCCGGAACAACAGGATTACCTAAAGGAGTGATTCTAACGCATAAGAGCTTAACAACAAGCGTTGCTCAACAAGTCGATGGAGAGAATCCGAATCTGTATTTAACAACTGAAGATGTTCTTCTTTGTGTTCTTCCATTGTTTCATATATTTTCACTTAACAGTGTGCTATTGTGCGCACTGAGAGCAGGGAGTGCTGTTCTGATAATGCATAAATTCGAGATCGGAACGTTGCTTGGTCTTATACAGAAACATAAAGTGACGGTGGCGATGGTTGTTCCGCCGCTAGTTTTGGCGTTAGCGAAGAATCCTTCGGTGGCGGAATTTGATCTTAGTTCAATACGGTTGGTGCTTTCAGGAGCCGCGCCGTTAGGGAAGGAGCTTGAAGAAACGCTTCATAACCGAATTCCTCAAGCCGTTTTGGGACAGGGTTACGGTATGACAGAGGCAGGCCCAGTACTATCCATGTCTTTGGGTTTTGCAAAGCATCCATTGCCAGTAAGCTCAGGTTCATGTGGCACAGTTGTAAGAAATGCAGAGCTTAAAGTTCTTGACTCTGAAACTGGTCGTTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATCCGTGGCCAACAAATCATGAAAGGATATTTGAATGATGAGAATGCAACAAAAACTACTATTGATGAGGAGGGTTGGCTTCATACTGGTGATGTTGGATATATAGATGACAATGATGAGATTTTCATCGTTGACAGGGTGAAAGAACTCATCAAATTCAAAGGCTTCCAAGTGCCCCCTGCTGAACTTGAAGGCCTTCTTGTAAGCCATCCATCTATTGCAGATGCAGCTGTCGTCCCGCAAAAAGATGTTGCAGCTGGTGAAGTTCCTGTTGCCTTTGTTGTAAGATCAAATGGACTTGATCTAACTGAAGAAGCTGTAAAGGAATTTATAGCTAAACAGGTTGTGTTTTATAAAAGACTGCACAAAGTTTATTTCATTCATGCAATTCCCAAGTCTCCAGCTGGGAAGATACTGAGGAAAGACCTCAGAGCAAAGTTAGAAAGTACCACTTAA 1980 0.4056 MVLNVAVPLTSSSLLLKLITIIHYFPPNPFYIVSPLVFLSSPANPLTSNFLSLILYISFSSLHFPNLLSSHPNKYNIIYLIHNKMLSLAPSIDAKQTTTTEVSTDSVVINQQKQKPSHDDYDSTNHIFKSKLPDIPISNHLPLHTYCFQKLPEISDRPCLIVASTGKTYTYAETYLQCRKIAAGLSKLGIQKGDVIMILLQNSAEFVLSFLAASMIGAVATTANPFYTSAEIFKQIAVSKTKLIITQAMYVDKLKQNEEKYESIDFKIITIDEPPVNCLHFSVISEANEDQLPEVEFDPEDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLIMHKFEIGTLLGLIQKHKVTVAMVVPPLVLALAKNPSVAEFDLSSIRLVLSGAAPLGKELEETLHNRIPQAVLGQGYGMTEAGPVLSMSLGFAKHPLPVSSGSCGTVVRNAELKVLDSETGRSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGLDLTEEAVKEFIAKQVVFYKRLHKVYFIHAIPKSPAGKILRKDLRAKLESTT* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4012 659 Gene3D - 556 658 IPR045851 -
Tpr2g4012 659 Gene3D - 118 555 IPR042099 -
Tpr2g4012 659 SUPERFAMILY Acetyl-CoA synthetase-like 132 657 - -
Tpr2g4012 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 126 654 - -
Tpr2g4012 659 PANTHER 4-COUMARATE--COA LIGASE 3 126 654 - -
Tpr2g4012 659 CDD 4CL 137 651 - -
Tpr2g4012 659 Pfam AMP-binding enzyme C-terminal domain 570 645 IPR025110 -
Tpr2g4012 659 Pfam AMP-binding enzyme 156 561 IPR000873 -
Tpr2g4012 659 ProSitePatterns Putative AMP-binding domain signature. 305 316 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4012 Tpr-Chr2 42516528 42526140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4012 124 568 Monolignol Biosynthesis Gene Families AT1G65060 71.875 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4012 K01904 - gmx:547492 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4012 2 42516528 42526140 Tpr2g4012 2 42516528 42526140 ECH