Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4011 ATGTTGTCATTAGCTCTTTCTATTGATTCCAAACAAACTACTACTACAGAAGTCTCTGCAGATTCTGTAGTAATTAACCAACAAAAACAAAAACCCTCCCATGATGATTATCATTCTACTAATCATATTTTTAAATCTAAATTACCAGATATACCAATATCTAACCACCTCCCACTTCACACCTACTGCTTCGAAAAACTTCCCGAAATCTCCGATCGTCCATGTCTCATCGTCGCTTCCACCGGAAAAACATACACCTATGCAGAAACTTATCTCCAATGTCGAAAAATCGCAGCCGGTTTATCCAAATTAGGAATCCAAAAAGGCGATGTAATCATGATTCTACTCCAAAATTCAGCCGAATTTGTTCTCTCCCTCGTCGCTGCCTCCATGATCGGTGCAGTTGCCACAACAGCTAATCCTTTCTACACCAGCGCTGAGATCTTCAAACAAATAACAGCTTCCAAGACGAAGTTGATTATCACGCAAGCAATGTACGTTGATAAACTGAAGCAGAACGAGGAGAAGGATGAATTAATTGAATTCAAGATAATCACCGTCGATGAACCTCCAGTGAATTGTTTACATTTCTCAGTGATTTCTGGAGCAAATGAAGATGCATTACCGAAAGTGGAATTCGATCCAGAAGATGCAGTGTTGCTTCCGTTTTCTTCAGGAACAACAGGATTACCTAAAGGAGTGATTCTAACGCATAAGAGCTTAATAACAAGCGTTGCTCAACAAGTTGATGGAGAGAATCCACATCTGTATTTAACAACCGAAGATGTTCTTCTTTGCGTTCTTCCATTGTTTCATATATTTGCGCTCAGCACTGTGCTATTGTGCGCACTGAGAGCAGGGAGTGCTGTTCTGTTAATTCATAAATTTGAGATCGGAACGTTGCTTGGTCTTATACAGAAACATAAAGTGACGGTGGCGATGGTTGTTCCGCCGCTAGTTTTGACGTTAGCAAAGAATCCTACTGTGACGGAATTTGATATTAGTTCGATAAGGTTGGTGCTTTCAGGAGCTGCGCCGTTAGGGAAGGAGCTTGAAGAAATGCTTCATAACCGAATTCCTCAAGCCGTTTTGGGACAGGGATACGGTATGACAGAGGCAGGTCCAGTACTGTCCATGTCTTTGGGTTTTGCAAAGCATCCATTGCCAGTAAGCTCGGGTTCATGCGGCACAGTTGTAAGAAATGCAGAACTTAAAGTTCTTGACTCTGAAACTGGTCGTTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATACGTGGCCAACAAATCATGAAAGGATATTTGAATGATGAGAATGCAACAAAAGCTACTATTGATGAAGAGGGTTGGCTTCATACCGGTGATATTGGATATATCGATGACAATGATGAGATTTTCATCGTTGACAGGGTGAAGGAACTCATCAAATTCAAAGGCTTCCAAGTGCCCCCTGCTGAACTTGAAGGCCTTCTTTTAAGACATCCATCTATTGCAGATGCAGCTGTTGTCCCGAAAAAGGATGTCGCTGCTGGTGAAGTTCCTGTTGCCTTTGTGGTAAGATCAAATGGACTTGATCTTACTGAAGATGCTGTAAAGGAGTTTATAGCTAAACAGGTGGTGTTTTATAAAAGACTGCACAAGGTTTATTTCATTCATGCAATTCCTAAGTCTCCATCAGGAAAGATACTGAGAAAAGACCTCAGAGCAAAGTTAGAAAGTACCACCCAAATGCCTTGA 1737 0.4122 MLSLALSIDSKQTTTTEVSADSVVINQQKQKPSHDDYHSTNHIFKSKLPDIPISNHLPLHTYCFEKLPEISDRPCLIVASTGKTYTYAETYLQCRKIAAGLSKLGIQKGDVIMILLQNSAEFVLSLVAASMIGAVATTANPFYTSAEIFKQITASKTKLIITQAMYVDKLKQNEEKDELIEFKIITVDEPPVNCLHFSVISGANEDALPKVEFDPEDAVLLPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPHLYLTTEDVLLCVLPLFHIFALSTVLLCALRAGSAVLLIHKFEIGTLLGLIQKHKVTVAMVVPPLVLTLAKNPTVTEFDISSIRLVLSGAAPLGKELEEMLHNRIPQAVLGQGYGMTEAGPVLSMSLGFAKHPLPVSSGSCGTVVRNAELKVLDSETGRSLGYNQPGEICIRGQQIMKGYLNDENATKATIDEEGWLHTGDIGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLLRHPSIADAAVVPKKDVAAGEVPVAFVVRSNGLDLTEDAVKEFIAKQVVFYKRLHKVYFIHAIPKSPSGKILRKDLRAKLESTTQMP* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4011 578 PANTHER 4-COUMARATE--COA LIGASE 3 42 570 - -
Tpr2g4011 578 CDD 4CL 53 567 - -
Tpr2g4011 578 Gene3D - 34 471 IPR042099 -
Tpr2g4011 578 Pfam AMP-binding enzyme 72 477 IPR000873 -
Tpr2g4011 578 Pfam AMP-binding enzyme C-terminal domain 486 561 IPR025110 -
Tpr2g4011 578 Gene3D - 472 575 IPR045851 -
Tpr2g4011 578 SUPERFAMILY Acetyl-CoA synthetase-like 48 573 - -
Tpr2g4011 578 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
Tpr2g4011 578 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4011 Tpr-Chr2 42511564 42514466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4011 40 484 Monolignol Biosynthesis Gene Families AT1G65060 70.982 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4011 K01904 - gmx:547492 887.486