Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g3970 | ATGGGATTCTGGGGAATTGAAGTTAAACCTGGCAAACCGGTTCCTTATCATACTGATAACGTGCAAGGAAAACTTCACGTCACTCAGGCTACTCTAGGAGATGGTGCACCGTCTGGTAAAAGCATTCTTCAGTGTTCTTCTGGACACAAAAATCCAGTTTATGTGTGTACTTTGCTGCCTAATAAGGTTGAGACGTGCTCTTTGAATCTTAAGTTTGATGAGGAAGACTTGGTGGCATTCTCAGTCATTGGTTCCCGAAGTATCCATCTTTCTGGTTATTTTGTGGCAGATGATGGGGATGACCTAAGGGATGACTATGAATATGATTCATTGGGAGAGGACGTGGGAACGGATTCAGAGGAGTCATCTGAATATGATAGTGAAAATGGATACGATGATCATTTTTTTGACGATAGTGATATGGAAATGTACCCATCTTCGCCCGTCCCTAATAGTGGAGTTGTGATTGAGGAAATACCCGATGACAAGCCTGAAAATGGAGATGATCCAGCAAAGCAATCGAAGAAAAAGGAACAGCCAGCTCTCTTGAAAGAGAAAGCCAGCAAAAGTTCTCAGCTTCCAGATGTCCCTAGTGGTGACAATAACCTCGTTCTGGAAAGTGAAGATGAAGATGGTTTCCCAATTTCCACCTCAGAGAAAGCTAAAAAACAAACCAACAAAAAAACTGGGAAATCCAATAAGAAGGAAAAAGATGTTGATCCCTCTGCTAGCTTAAAACGAAAAGGCCAAGCTGTCGAAGAGGATGAGCAGTTGCAAGATGGGAAGAATAAGACAAAGAAAAATAAGATGAAAGATCATGCTAAGGAAGAAATTGCTCATGTAAAGGAGACTAATGTTACTTTGCAAGATGAAAAGCATTCTGAGGGTGAGGAGGTTAAAACTACAACCAACCAGAACAATGTTTCTCATGAAAATGCTGGAGATGATGTAAAACAATCAAATAATGAAGTCCTCGTTGAGAAGAAAAACAAGAAGAAAAAGAAGAAAAAGATCAACGAGCCTGAAGGAGAAGCTGCTGCTAATGAAATTACCACAACTGTTGAAAATCAGAAGGGTTCCACCTCTGAGAAAAAAGGGAAAGGTCAAACTGAAGCCAAACCATCTAATGTGATTACCTATCCAAATGGGTTGGTTATAGAGGACAGATTTATGGGTAAACCAGATGGCAAAAGAGCTGATCTTGGAAAACAGGTCAGTGTTAAATATATTGGCAAGCTAAAAAAAGATGGGAAAATATTTGATTCATGTATCGGAAAAGCACCCTTTAAGTTTCGCCTTGGTGTAGGACAAGTCATCAAGGGGTGGGATGTTGGCATCAATGGGATGAGGGTTGGGGACAAAAGAAGACTTACAATTCCACCATCTATGGGATACGGAGACAAACGCGTTGGGCTTATACCACAAAATTCATGGCTTGTATTTGATGTTGAGTTGGTTGGTGTTGGTAACTAA | 1473 | 0.406 | MGFWGIEVKPGKPVPYHTDNVQGKLHVTQATLGDGAPSGKSILQCSSGHKNPVYVCTLLPNKVETCSLNLKFDEEDLVAFSVIGSRSIHLSGYFVADDGDDLRDDYEYDSLGEDVGTDSEESSEYDSENGYDDHFFDDSDMEMYPSSPVPNSGVVIEEIPDDKPENGDDPAKQSKKKEQPALLKEKASKSSQLPDVPSGDNNLVLESEDEDGFPISTSEKAKKQTNKKTGKSNKKEKDVDPSASLKRKGQAVEEDEQLQDGKNKTKKNKMKDHAKEEIAHVKETNVTLQDEKHSEGEEVKTTTNQNNVSHENAGDDVKQSNNEVLVEKKNKKKKKKKINEPEGEAAANEITTTVENQKGSTSEKKGKGQTEAKPSNVITYPNGLVIEDRFMGKPDGKRADLGKQVSVKYIGKLKKDGKIFDSCIGKAPFKFRLGVGQVIKGWDVGINGMRVGDKRRLTIPPSMGYGDKRVGLIPQNSWLVFDVELVGVGN* | 491 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g3970 | 490 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 397 | 486 | IPR001179 | GO:0003755 | |
| Tpr2g3970 | 490 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 402 | 489 | IPR001179 | GO:0003755 | |
| Tpr2g3970 | 490 | MobiDBLite | consensus disorder prediction | 163 | 373 | - | - | |
| Tpr2g3970 | 490 | SUPERFAMILY | FKBP-like | 345 | 488 | - | - | |
| Tpr2g3970 | 490 | Coils | Coil | 271 | 291 | - | - | |
| Tpr2g3970 | 490 | Pfam | Nucleoplasmin-like domain | 3 | 95 | IPR041232 | - | |
| Tpr2g3970 | 490 | MobiDBLite | consensus disorder prediction | 163 | 184 | - | - | |
| Tpr2g3970 | 490 | Gene3D | - | 343 | 489 | IPR046357 | GO:0003755 | |
| Tpr2g3970 | 490 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 1 | 241 | - | - | |
| Tpr2g3970 | 490 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 259 | 488 | - | - | |
| Tpr2g3970 | 490 | MobiDBLite | consensus disorder prediction | 300 | 319 | - | - | |
| Tpr2g3970 | 490 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 241 | - | - | |
| Tpr2g3970 | 490 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 259 | 488 | - | - | |
| Tpr2g3970 | 490 | SUPERFAMILY | Nucleoplasmin-like core domain | 3 | 93 | IPR036824 | - | |
| Tpr2g3970 | 490 | MobiDBLite | consensus disorder prediction | 213 | 299 | - | - | |
| Tpr2g3970 | 490 | Gene3D | Nucleoplasmin core domain | 1 | 100 | - | - | |
| Tpr2g3970 | 490 | PIRSF | FK506-bp_FPR3 | 236 | 489 | IPR023566 | GO:0003755 | |
| Tpr2g3970 | 490 | PIRSF | FK506-bp_FPR3 | 1 | 53 | IPR023566 | GO:0003755 | |
| Tpr2g3970 | 490 | PIRSF | FK506-bp_FPR3 | 46 | 252 | IPR023566 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr2g3970 | Tpr-Chr2 | 42226512 | 42230897 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr2g3970 | 402 | 486 | Calmodulin-binding Proteins | AT3G25230 | 50.575 | 1.25e-15 | 77.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr2g3970 | K14826 | - | gmx:100792856 | 623.624 |