Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3957 ATGGGGTGCATTTGCTCAAAATACTCAAACAAAGACAAAGTTGAAGAATATGGGAAAGGAAATGAGTGGAATAAGTCTTCAGTGCAAATAGTTGCTCCTACACAGTTAAATGGGGTTGGAGTTGGTTCGGATGGTTCTAACTCAGTGCGTCGTTTGGCTAAGGCGCCTTCGCAAGTGGTTAGAGCAGAAGAAGAGAAAAGCAGTCACTTTGATGTTGCTATAAAAAGTCTACATCATAGATGTATGACAGTAAGTTCTAGTGTAGGTGAAAAAAAGCCACTAATGAGTAGAATACTCAGTGTGCAAAATTTTTCAGGAGAACAATATGTTGATTCTGGGTGGCCAATATGGTTGTCTTCGGTTGCTAAAGAGGCTATCAAAGGTTGGGTTCCGAGAAGGGCGGACTCTTTTGAAAAATTAGACCAAATTGGACAAGGGGCGTATAGTAGTGTGCACAAAGCTATTGACCTTGAAACTGGTAAATATGTGGCTTTGAAGAAAGTTCGATTTTCAAGTGGAGATGTTGAAAGTGTCCGTTTTATGGCAAGAGAAATCTATATTTTGCGTCAACTTGACCATCCTAACATCCTCAAACTTGAAGGTCTTGTCACATCTAGAACATCAACTAGTTTGTACCTTGTTTTTGAATATATGGAGCATGACCTTGCTGGATTAGCAGCTAGACCTGGTGTCAAGTTCACTGAACCACAGATTAAATGTTTCATGAAGCAACTATTATCCGGGCTAGAACACTGTCATAGTAGGGGTGTGTTGCATCGTGACATCAAGGGCTCTAATCTTCTAGTTGATAAAGACGGAAATCTAAAGATTGGAGATTTTGGTCTAGCAACTGTCCATGAACCTGATAGCAAGGTGCCATTGACAAGTCGTGTCGTGACTCTTTGGTATAGGGCCCCTGAACTTTTACTAGGTGCTACTGACTATGGTGCTACAATTGACTTGTGGAGTGCTGGTTGCATTCTAGCTGAATTGTTGATGGGCAAGCCTATCATGCCTGGAAGGACAGAGGTGGAACAAATGCACAAAATTTTTAAGCTTTGTGGTTCTCCATCTGAAGACTATTGGCAAAGGAAAAAACTTCCATATGCAACAAGTTTTAAACCACAAAACGCTTATAAACGACAACTAGCCGATACATTTAAAGACTTCCCTTCTACTGCATTGGAACTTGTTGATAGGCTCCTTTCAATGGAACCAGAACAACGAGGAACTGCAACTTTCGCCCTTCAGAGTCAGTTCTTCACTACGGATCCTTTGCCTTGTGATCCTTCGCGTTTACCAAAGTTTCCGCCAAGCAAGGAGTTCGATCTAAAGCGTCAAAATAAAGAAGCCGCAAGAAAAAATATAGAAGCTGTCAAAGTATGCGGACCAAGAACTGTTTTAAGAGGATCGGGAAATACCAAAGCATTGGAAGCACCGGACTATAATGCTCGAGGAGATTTATCTTTGCGGGGTAAGCCAAATACTAGAATGTCCCGTCTTAGATATGAATCACAAGAAGACGATGAGTCGAACCATAAGTGTGAACCAAGTAGAATATCTATGCACAACGGCTATACAAATTCAGCAGCATTGACGCACAGCAATACAACAGGACCATCCTCGTTATGCAATAAGAGACCAGAATCATCTATACAAAATATTCCTGAGTTAAGGACACAAAGGTCTCAATTGAATGAAGTAGCAGTAGATTCTTCTATTAAAAAGGAACAAGGCATGTCAGGCCAAGAAACCGGAACGGGTTATGTGCCTAAGAAAAATAGAATCCATTGTTCCGGACCGTTGATGATGTCTTCTGGTGGAAATATTGATGACATGCTAAGAGAGCACGAACGGTTAATGCAAGATGTTTTCCGTAGTGTCAAGAAGGGGAATCCGCAATGA 1905 0.4126 MGCICSKYSNKDKVEEYGKGNEWNKSSVQIVAPTQLNGVGVGSDGSNSVRRLAKAPSQVVRAEEEKSSHFDVAIKSLHHRCMTVSSSVGEKKPLMSRILSVQNFSGEQYVDSGWPIWLSSVAKEAIKGWVPRRADSFEKLDQIGQGAYSSVHKAIDLETGKYVALKKVRFSSGDVESVRFMAREIYILRQLDHPNILKLEGLVTSRTSTSLYLVFEYMEHDLAGLAARPGVKFTEPQIKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLVDKDGNLKIGDFGLATVHEPDSKVPLTSRVVTLWYRAPELLLGATDYGATIDLWSAGCILAELLMGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRKKLPYATSFKPQNAYKRQLADTFKDFPSTALELVDRLLSMEPEQRGTATFALQSQFFTTDPLPCDPSRLPKFPPSKEFDLKRQNKEAARKNIEAVKVCGPRTVLRGSGNTKALEAPDYNARGDLSLRGKPNTRMSRLRYESQEDDESNHKCEPSRISMHNGYTNSAALTHSNTTGPSSLCNKRPESSIQNIPELRTQRSQLNEVAVDSSIKKEQGMSGQETGTGYVPKKNRIHCSGPLMMSSGGNIDDMLREHERLMQDVFRSVKKGNPQ* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3957 634 Pfam Protein kinase domain 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3957 634 ProSiteProfiles Protein kinase domain profile. 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3957 634 Gene3D Transferase(Phosphotransferase) domain 1 220 461 - -
Tpr2g3957 634 SUPERFAMILY Protein kinase-like (PK-like) 130 429 IPR011009 -
Tpr2g3957 634 SMART serkin_6 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3957 634 MobiDBLite consensus disorder prediction 564 586 - -
Tpr2g3957 634 Gene3D Phosphorylase Kinase; domain 1 124 219 - -
Tpr2g3957 634 CDD STKc_CDK9_like 137 421 - -
Tpr2g3957 634 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Tpr2g3957 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Tpr2g3957 634 PANTHER CELL DIVISION PROTEIN KINASE 68 626 - -
Tpr2g3957 634 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 68 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3957 Tpr-Chr2 42141957 42146057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3957 129 454 Core Cell Cycle Gene Families AT5G10270 51.437 7.25e-118 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr2g3957 Pkinase 2.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3957 K08819 - gmx:100791743 865.144