Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3940 ATGGTTGCCACCGCTATCTCAACCGTTGTCACCGATGCCAATCTTCACACCCGATTTCATTCCTCATTTTCTTCTTCTTCTTCTTCTATCTCTCTTCACTCTCGCTGCTTTTATTCTCACCCCAAACACTTTTCTTCTTCTATCAGATGCCAATCAGTTAATAGTGATAAGAAGAAACAAAGTAGTAGAAGAAATGTCTTTGACAACGCCAGCAACCTCTTAACCACCTTGTTAAGTGGTGGAAGTTTAGGTTCTATGCCTATAGCTGAAGGTGCTGTCACCGATCTCTTTGATCGACCTCTGTTTTTCTCACTATATGATTGGTTCATACAGCATGGCTCTGTGTATAAACTTGCGTTTGGGCCGAAAGCATTTGTTGTTGTATCAGATCCCATTGTTGCAAGACATATTCTGAGAGAAAATGCCTTTTCTTATGACAAGGGAGTACTTGCTGATATCCTAGAGCCAATTATGGGAAAAGGACTAATACCTGCAGACCTTGAGACATGGAAGCAAAGGAGAAGAGTAATTGCTCCGGGTTTCCATACCTCATACTTGGAAGCTATGGTAAAACTATTCACTTCCTGTTCGGAAAGAACAGTATTAAAGTTCAATAACCTTCTTGAAGGAGAGGGGTATGATGGACAGAAGTCAATTGAATTGGACCTTGAGGCAGAATTTTCAAATTTGGCTCTTGATATTATTGGGCTAGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAATGAATCTCCCGTTATTAAGGCTGTCTATGGCACTCTTTTTGAAGCCGAACACAGATCCACTTTCTATATTCCATATTGGAAACTTCCATTAGCAAGTTGGATAGTACCCAGACAAAGGAAGTTTCAGGATGACCTTAAGGTCATTAATAGTTGTCTTGACGGACTTATCAGAAATGCAAAAGAGAGCCGGCAGGAAACAGATGTTGAGAAACTGCAACAAAGGGATTACTCAAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTAGTTGATATGCGGGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACGACGGCTGCAGTTCTTACATGGGCAGTTTTCCTGCTAGCTCAAAATCCTGACAAAATGAAGAAGGCTCAAGCAGAGGTAGATTCGGTGCTGGGTATAGGGAGGCCAACTTTTGAATCGCTTAAAAAGTTGCAGTACATCAGGTTAATTGTTGTGGAGGCTCTTCGATTATATCCACAACCACCTCTGCTGATTAGACGTTCACTCAAATCAGATGTTTTACCAGGAGGATATAAAGGTGACAAAGATGGTTATACAATTCCGGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCACCGATCTCCATATTTTTGGGACCGCCCTGATGATTTCGAGCCTGAGAGATTTCTAGTGCAAAACAAGAATGAAGATATTGAAGGGTGGGCTGGTTTTGACCCATCTCGAAGTCCTGGAGCCTTGTATCCAAACGAGATTATATCGGATTTTGCGTTCTTGCCTTTTGGTGGCGGACCTCGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCCACTGTAGCACTGACTATGCTACTACAGAATTTCGATGTGAAATTGAAGGGGACCCCTGAATCGGTCGAACTAGTTACCGGGGCAACTATCCATACCAAAAATGGATTGTGGTGCAATTTGAGGAAGAGATCTTCTGTACATTGA 1752 0.4207 MVATAISTVVTDANLHTRFHSSFSSSSSSISLHSRCFYSHPKHFSSSIRCQSVNSDKKKQSSRRNVFDNASNLLTTLLSGGSLGSMPIAEGAVTDLFDRPLFFSLYDWFIQHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLETWKQRRRVIAPGFHTSYLEAMVKLFTSCSERTVLKFNNLLEGEGYDGQKSIELDLEAEFSNLALDIIGLGVFNYDFGSVTNESPVIKAVYGTLFEAEHRSTFYIPYWKLPLASWIVPRQRKFQDDLKVINSCLDGLIRNAKESRQETDVEKLQQRDYSNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKAQAEVDSVLGIGRPTFESLKKLQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGYKGDKDGYTIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEDIEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVKLKGTPESVELVTGATIHTKNGLWCNLRKRSSVH* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3940 583 PANTHER CYTOCHROME P450 FAMILY 4 81 579 - -
Tpr2g3940 583 Gene3D Cytochrome P450 85 583 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 SUPERFAMILY Cytochrome P450 96 579 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS P450 superfamily signature 360 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS P450 superfamily signature 517 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS P450 superfamily signature 526 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 519 528 IPR017972 GO:0005506|GO:0016705
Tpr2g3940 583 PRINTS E-class P450 group I signature 109 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS E-class P450 group I signature 349 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS E-class P450 group I signature 369 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS E-class P450 group I signature 516 526 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PRINTS E-class P450 group I signature 526 549 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g3940 583 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 81 579 - -
Tpr2g3940 583 Pfam Cytochrome P450 110 573 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3940 Tpr-Chr2 42015022 42021357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3940 45 580 Cytochrome P450 AT4G15110 77.654 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3940 K24543 - gmx:606504 1000.35