Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3917 ATGTCATATGTAACAACATCAGATTCTGCTAGTAAAAACAATAACATAGTATGTAGTAGTAACACTAGTACGAGGAAGTTGTCGAATATGGATCATGTTGCTAATGATAATAATATTGTAGCCGACAATATTAATAAATCTAAACAAATTGAACGGCGTTATGATGATTATAGAAAGAAAAGAAAGCGTCCATCTAAAGTGGCGGTGGTTCCGACGATGGAAACAACCACCGGAGACACCGCTACGGCGTCACATGGTTTTATATCGGTTATTGGACGGAGGAGAGTGATGGAAGATGCTATTAAGGTGATTCCACGTTTTGTGGCGGCGGAAAAGCAACCGTGTGGTTATGATTTCTTTGCGGTTTATGATGGTCACGGTGGTATGACGGTGGCGAATGCTTGTCGTGATAGGTTGCATGTTTTGTTGGCGGAGGAAGTGAAGGAGGGAAGGAGGAATGATGGGTTTGATTGGTGTAAGGCTATGTGTGAGTGTTTTATGAAGATGGATAGGGAAATTGGTGTTGGTGGTGGTTTTGATGGTGATGTTGATGGGAATACGGTGGGTTCTACGGCGGCTGTTGTGGTGGTTGGGAAGGAGGAGATTGTGGTGGCGAATTGTGGTGACTCTAGGGCGGTTTTGTGTAGTGGTGGTGTAGCGGTGCCACTTTCACGTGATCATAAGCCGGATCTTCCCGATGAAAGAGAGAGGATTGAAGCAGCGGGTGGAAGAGTGATTAATTGGAATGGAAGTCGCGTTTTAGGAGTTCTTGCTACTTCTAGATCCATAGGGGATCACTGCATGAAGCCATTTGTGATATCTCAACCAGAGATAAACGTGTACGGAAGAACAAAATCAGATGAATTTGTTGTAGTAGCAAGTGATGGTCTTTGGGATGTAGTTTCAAACAATTTTGTTTGTGAAGTTGTAAGAAGTTGCCTCCAAGGTCATATGAGGATGAGGCATAATAATAATCATAATCATAATCATATAAAAGAAGATCATCATACTATTAAAAGTTATGCAGCTGAGGCTGCAGCAATCTTAGCTGAATTGGCTATGGCTAAGGGAAGCAAAGACAACATTAGTGTTATAGTCATTCAGCTCAACACTAACATTTGA 1122 0.4198 MSYVTTSDSASKNNNIVCSSNTSTRKLSNMDHVANDNNIVADNINKSKQIERRYDDYRKKRKRPSKVAVVPTMETTTGDTATASHGFISVIGRRRVMEDAIKVIPRFVAAEKQPCGYDFFAVYDGHGGMTVANACRDRLHVLLAEEVKEGRRNDGFDWCKAMCECFMKMDREIGVGGGFDGDVDGNTVGSTAAVVVVGKEEIVVANCGDSRAVLCSGGVAVPLSRDHKPDLPDERERIEAAGGRVINWNGSRVLGVLATSRSIGDHCMKPFVISQPEINVYGRTKSDEFVVVASDGLWDVVSNNFVCEVVRSCLQGHMRMRHNNNHNHNHIKEDHHTIKSYAAEAAAILAELAMAKGSKDNISVIVIQLNTNI* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3917 373 CDD PP2Cc 84 369 IPR001932 -
Tpr2g3917 373 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Tpr2g3917 373 Gene3D - 79 372 IPR036457 -
Tpr2g3917 373 SUPERFAMILY PP2C-like 79 370 IPR036457 -
Tpr2g3917 373 Pfam Protein phosphatase 2C 85 362 IPR001932 -
Tpr2g3917 373 ProSiteProfiles PPM-type phosphatase domain profile. 84 369 IPR001932 -
Tpr2g3917 373 PANTHER ALPHABET, ISOFORM E-RELATED 47 371 - -
Tpr2g3917 373 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 47 371 - -
Tpr2g3917 373 SMART PP2C_4 74 367 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3917 Tpr-Chr2 41869427 41871516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3917 67 369 PP2C-type Phosphatase Gene Family AT1G07430 42.814 5.20e-82 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3917 K14497 - gmx:100813248 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3917 2 41869427 41871516 Tpr2g3917 2 41869427 41871516 ECH