Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3915 ATGGAAGAACGTTCCCAAAATAAGGCAAAGATTTCCTCAAACTCAACTAAAACTACTTCTGAAGAAGTGAGCAGCAGTGAGTGGGATTTCATAGAGATGAGCGAACAAGAAGAGGATCTCATTTACAGGATGTATGGTCTAGTTGGAGATAGGTGGAATTTGATAGCAGGTCGCATTCCTGGGCGTAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGCTCATGCTTTTTCTGCCAAAACAAGAAGTGAACGTAAAGCTAATTAA 273 0.4029 MEERSQNKAKISSNSTKTTSEEVSSSEWDFIEMSEQEEDLIYRMYGLVGDRWNLIAGRIPGRKAEEIERFWIMRHAHAFSAKTRSERKAN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3915 90 CDD SANT 32 71 IPR001005 -
Tpr2g3915 90 Gene3D - 33 90 - -
Tpr2g3915 90 SUPERFAMILY Homeodomain-like 34 72 IPR009057 -
Tpr2g3915 90 MobiDBLite consensus disorder prediction 1 26 - -
Tpr2g3915 90 SMART sant 29 77 IPR001005 -
Tpr2g3915 90 MobiDBLite consensus disorder prediction 8 26 - -
Tpr2g3915 90 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 87 - -
Tpr2g3915 90 Coils Coil 82 90 - -
Tpr2g3915 90 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 1 87 - -
Tpr2g3915 90 Pfam Myb-like DNA-binding domain 33 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3915 Tpr-Chr2 41839460 41841863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3915 33 71 MYB Transcription Factor Family AT5G52600 58.974 1.52e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr2g3915 Myb_DNA-binding 7.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3915 K09422 - jre:108996439 116.701