Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3907 ATGGGTCATTTTCTGTTTTCAGTTTACTTGATTGGTTTGTTAGTGTTTCAAGGAAATGCAGAACCTGTTGAAGACAAGAAAGCATTGTTAGAATTTGTTGAAAAATTACAACCTTTTAGGCCTTTGAATTGGAATTTGAGTTCATCAATTTGTACTAGTTGGAATGGTGTAACTTGTAGTCAAGATCAGTCTCAAATTATCGCGATTCGATTACCGGGAGTTGGATTTAATGGCACAATTCCTCCTAATACAATTAGTAGAATCAAAGGGTTGCAAAAATTGAGTCTTAGATCCAATTTTATAACTGGTCATTTTCCTTATGATTTTATCAATTTAAAGAATCTTTCTTTTCTTTATCTTCAATTCAATAATTTCATTGGTCTTTTGCCTGATTTTGCTGTTTGGAACAATCTTTCTGTTGTTAATTTGTCTAATAACCGTTTCATTGGCGAAATTCCTTTATCTCTTTCCAATTTGAGTCATCTTGCTTGTTTGAATCTTGCAAACAACTCGCTTTCGGGCGAAATACCTTATATAAACTTGCCATTGTTGAAAAAATTGAATTTGTCTAACAATAATTTACAAGGGGTTGTTCCTGTTTCTCTTCAGAGGTTTCCTAAGTCAGCATTTGCTGGAAACAATGTTTCTATTGGTACATTTTCTCAGAGGTTTCCTAAATCTGAGAAACATAGAAGGATTGGTGGAACATTAGTGTTGGGAATTATTGTTGTTGGTGCTTTTATATGCTTTGCAGCATTGGTTGTTTTTATTTTTGTTTTGTGTTCTAAAAAGAAAGATGAAGATGTTTTTATTGGCAAGTTGGAGAAAGGAGGAAAAATGTCACCTGAAAAAGTGGTCTCAAGAAACCAAGATGCAAACAATAAGCTTTTTTTCTTTGAGGAATGTAACTATGCTTTTGATTTGGAGGATTTATTAAGGGCTTCTGCTGAGGTACTTGGTAAGGGAACATTTGGTGCTGCATACAAGGCAGTACTAGAGGATGCAACCACGGTTGTCGTCAAGAGGCTAAAAGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAACACATGAATATTGTCGGAAGTCTTAAACATGAGAATGTGGTTGAGCTAAAAGCATATTACTATTCCAAAGATGAGAAACTTGTTGTATATGACTACTACAGTCAGGGTAGCATCTCGGCTTTGTTGCATGGTAAAAGAGGAGAGGATAAGGTGGCTTTAGATTGGAATACTCGGATCAAAATAGCATTAGGTGTTGCACGAGGTCTTGCTCGTATCCATTCTGAGAACGGTGGGAAACTTGTACATGGCAATGTTAAATCCTCAAATATCTTTCTCAACACTAAACAGTACGGTTGTGTATCTGATCTTGGACTAGCAACCATAATGAGTTCAGTCACCCAGCCCATTTCGCGAGCAGCCGGTTATCGAGCACCTGAAGTTACAGACACCAGGAAAGCAACACAGGCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTAGAGCTGCTAACCGGGAAATCCCCTATCCACACAACTAGAGGCGATGAGATTGTCCACCTTGTGAGATGGGTTCATTCAGTTGTGAGAGAGGAGTGGACTGCTGAAGTATTTGACATAGAGCTTATGAGATGTCCTAATATAGAAGAAGAGATGGTAGAGATGTTACAGATAGCCATGTCATGTGTTGCAAGAATGCATGATCAAAGACCTGCGATGTCAGAAATCGCAAAGATGATAGAAAATGTAAGGCAGATCGATATAGAGAATCAGCCATCATCCGAGAGCCAAGCTGAAAATGCAACACAGCATAAAATCTCTCAACTTGATAGTCCACTCTCTACCGAAGAAGGAGGTGAGTGA 1866 0.381 MGHFLFSVYLIGLLVFQGNAEPVEDKKALLEFVEKLQPFRPLNWNLSSSICTSWNGVTCSQDQSQIIAIRLPGVGFNGTIPPNTISRIKGLQKLSLRSNFITGHFPYDFINLKNLSFLYLQFNNFIGLLPDFAVWNNLSVVNLSNNRFIGEIPLSLSNLSHLACLNLANNSLSGEIPYINLPLLKKLNLSNNNLQGVVPVSLQRFPKSAFAGNNVSIGTFSQRFPKSEKHRRIGGTLVLGIIVVGAFICFAALVVFIFVLCSKKKDEDVFIGKLEKGGKMSPEKVVSRNQDANNKLFFFEECNYAFDLEDLLRASAEVLGKGTFGAAYKAVLEDATTVVVKRLKEVAVGKKDFEQHMNIVGSLKHENVVELKAYYYSKDEKLVVYDYYSQGSISALLHGKRGEDKVALDWNTRIKIALGVARGLARIHSENGGKLVHGNVKSSNIFLNTKQYGCVSDLGLATIMSSVTQPISRAAGYRAPEVTDTRKATQASDVYSFGVVLLELLTGKSPIHTTRGDEIVHLVRWVHSVVREEWTAEVFDIELMRCPNIEEEMVEMLQIAMSCVARMHDQRPAMSEIAKMIENVRQIDIENQPSSESQAENATQHKISQLDSPLSTEEGGE* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3907 621 Gene3D Transferase(Phosphotransferase) domain 1 389 609 - -
Tpr2g3907 621 MobiDBLite consensus disorder prediction 590 615 - -
Tpr2g3907 621 Pfam Protein kinase domain 316 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3907 621 Gene3D Ribonuclease Inhibitor 135 224 IPR032675 -
Tpr2g3907 621 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Tpr2g3907 621 SUPERFAMILY Protein kinase-like (PK-like) 317 581 IPR011009 -
Tpr2g3907 621 ProSitePatterns Protein kinases ATP-binding region signature. 319 350 IPR017441 GO:0005524
Tpr2g3907 621 PANTHER OS05G0588300 PROTEIN 16 595 - -
Tpr2g3907 621 PANTHER PROTEIN, PUTATIVE-RELATED 16 595 - -
Tpr2g3907 621 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Tpr2g3907 621 Pfam Leucine Rich Repeat 184 204 IPR001611 GO:0005515
Tpr2g3907 621 ProSiteProfiles Protein kinase domain profile. 313 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3907 621 SUPERFAMILY L domain-like 38 204 - -
Tpr2g3907 621 MobiDBLite consensus disorder prediction 590 621 - -
Tpr2g3907 621 Gene3D Phosphorylase Kinase; domain 1 279 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3907 Tpr-Chr2 41777990 41781569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3907 14 602 Receptor kinase-like Gene Family AT4G23740 61.047 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr2g3907 Pkinase 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3907 - - gmx:100804799 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3907 2 41777990 41781569 Tpr2g3907 2 41777990 41781569 ECH
Tpr2g3907 2 41777990 41781569 Tpr3g0587 3 5766809 5770710 PCT