Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3899 ATGACTTCGAATACTACATCTGGAAATGTTTGCCCGTCGCCAATGAAGTCCACATCTAACGGTGTATTTCAGGGAGATCACCCTCTTGATTATGCACTTCCCTTGGCTATTTTACAGATATGCCTTGTTCTTGTAGTCACAAGGGGATTGGCTTATCTTCTAAAACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTGTTGGAGGAATACTACTTGGGCCATCAGCACTTGGACGGAATAAAAGCTATCTACATGCAGTTTTCCCACCCAAGAGTCTTCCAGTATTAGATACTCTAGCAAACCTTGGCCTTATATTCTTTCTATTTTTAGCAGGCATAGAGTTAGATCCCAAATCTCTTCGGCAAACTGGAGGACGAGTCCTTGCAATTGCTATGGTCGGAATAAGCTTACCCTTTGCACTAGGGATTGGTTCATCATTTGTTCTGAAAGAAACAATTGCCAAAGATGTAAATACTTCTGCATTTCTCGTATACATGGGAGTTGCTCTGTCTATAACTGCATTTCCTGTATTAGCCCGTATTTTGGCTGAGTTAAAACTTCTAACCACCAGTGTCGGACAAATGGCCATGTCGGCTGCAGCAGTTAATGATGTAGCTGCCTGGATTCTTCTTGCTCTGGCTGTTGCCTTATCAGGAAATACCCAATCTCCATTAGTGTCATTGTGGGTCTTTTTAAGTGGGATTGTTTTTGTCGTTTTTTCAATCCTCATTGTCCTTCCAATTTTCAAATGGATGGCTCAACAATGCCATGAAGGTGAGCCAGTCGATGAGTTGTACATATGTTCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTCACAGATGCTATTGGAATTCATGCCATGTTTGGCGCGTTTGTTTTTGGAATTCTGATTCCGAAAGATGGACCATTTTCCGGCGCTCTTGTGGAGAAAATTGAGGATCTTGTGTCTGGTTTATTGCTACCACTCTATTTTGTGTCAAGTGGATTGAAGACTGATGTAGCCACCATTCAGGGGCTGCAGTCATGGGGTCTTCTAGTTTTCGTTACATTTACTGCTTGTTTTGGGAAGATTGTTGGGACTATTGTAGTGTCTCTTTTATGTAAAGTGTCTTTTAATGAGTCTGTAGTGCTTGGATTCTTGATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAAACCTTTGCCATTATGGTTCTCATGGCTCTCGTTACTACTTTCATGACCACTCCTCTTGTGATGGCTGTGTACAAGAGGAAAGCAGGAATATTTGATTACAAATACAAAACAATCGAAAGGAAAATTTCAGACAGCCAATTGAGGATTCTTGTTTGTTTCCACGGTGCAAGGAATATTCCATCGGTGATAAATTTGATTGAGACTTCAAGAGGAATAAAGAAGCGTGATGCACTTTGTGTGTATTCAATGCACCTTAAAGAATTTTCCGAGAGGTCCTCGTCAATACTAATGGTACAAAAGGTAAGAAAAAACGGATTGCCGTTTTGGAATAAAGGTCACCGTGCAAATTCTGACCATGTTATTGTGGCATTTGAGGCTTACCAAAAACTAAGCCAAGTTTGTGTCCGTCCAATGGTAGCAATCTCCTCAGTAGCTGACATTCATGAAGACATATGTGCAACCGCTGAAAGAAAGAGAGCCGCAATCATCATTCTCCCATTTCATAAGCAACAAAGATTAGACGGTTCACTTGACATTACAAGAAATGATTTTCGATTTGTTAACAAAAGGGTACTCGAGCATGCACCGTGCTCGGTTGGAATTTTTGTTGATCGCGGGCTTGGTGGTACATGTCATGTGTCTGCAAGTAATGTTTCTTATTGTGTTTCTGTGCTTTTCTTTGGCGGTGGTGATGACCGTGAAGCTCTTGCTTATGGAGCTCGTATGGCTGAGCACCCTGGCATAAAATTAGTGGTTATTCGTTTCTTAGTGGACACTAATATTTTAGGGGAGATTACCAAAGTTGACGTTGGAGAATCATCTAGCGGTAAATCAATCTCAGAGGATGAGGAATTCCTTGCGGAATTTAAGCTGAAAACGGCCAGTGATGAATCCGTTATCTATGAAGAGAAAATTGTAAAAGATGCTGCAGAAACAGTTGCTGCTATCCGTGAGTTTAATTCTTGCAATCTGTTTCTTGTGGGTCTAAGGCCAACCGGTGAATTAGCCTGTGCTCTGGAAAGAAGCGACTGCCTGGAACTAGGACCTGTTGGTGATTTGTTGGCATCCCAAGATTTCCCCACAACAGCATCAGTTTTGGTGATGCAACAGTATCACAATGGGGCGCCGACGAATTTAGGCCCAGTAATGGAGGAACATTCACACGATGTAGACACAGAATCTGTCTAA 2406 0.4173 MTSNTTSGNVCPSPMKSTSNGVFQGDHPLDYALPLAILQICLVLVVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLHAVFPPKSLPVLDTLANLGLIFFLFLAGIELDPKSLRQTGGRVLAIAMVGISLPFALGIGSSFVLKETIAKDVNTSAFLVYMGVALSITAFPVLARILAELKLLTTSVGQMAMSAAAVNDVAAWILLALAVALSGNTQSPLVSLWVFLSGIVFVVFSILIVLPIFKWMAQQCHEGEPVDELYICSTLAAVLAAGFVTDAIGIHAMFGAFVFGILIPKDGPFSGALVEKIEDLVSGLLLPLYFVSSGLKTDVATIQGLQSWGLLVFVTFTACFGKIVGTIVVSLLCKVSFNESVVLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALVTTFMTTPLVMAVYKRKAGIFDYKYKTIERKISDSQLRILVCFHGARNIPSVINLIETSRGIKKRDALCVYSMHLKEFSERSSSILMVQKVRKNGLPFWNKGHRANSDHVIVAFEAYQKLSQVCVRPMVAISSVADIHEDICATAERKRAAIIILPFHKQQRLDGSLDITRNDFRFVNKRVLEHAPCSVGIFVDRGLGGTCHVSASNVSYCVSVLFFGGGDDREALAYGARMAEHPGIKLVVIRFLVDTNILGEITKVDVGESSSGKSISEDEEFLAEFKLKTASDESVIYEEKIVKDAAETVAAIREFNSCNLFLVGLRPTGELACALERSDCLELGPVGDLLASQDFPTTASVLVMQQYHNGAPTNLGPVMEEHSHDVDTESV* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3899 801 Gene3D - 35 435 IPR038770 -
Tpr2g3899 801 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr2g3899 801 PANTHER CATION/H + ANTIPORTER 7 790 - -
Tpr2g3899 801 PANTHER CATION/H(+) ANTIPORTER 18 7 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3899 Tpr-Chr2 41722457 41726518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3899 5 800 Antiporter Super Family AT5G41610 67.120 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3899 - - gmx:100810155 1226.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3899 2 41722457 41726518 Tpr2g3899 2 41722457 41726518 ECH