Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3898 ATGCTATGCTATGCTTACCAAATCAAGTACTGTATAAATAAATACTACACACACCCTTGTCTCGCAGGTGAAATTCGCGCTGTCGAAATGACTTCCAACACCACTTCTGGAAATGTTTGCTCACCACCGATGCAGTCCACATCTAATGGTGTATTTCAAGGAGATAACCCTCTTGATTTTGCACTTCCCTTGGCTATTTTGCAGATATGCCTTGTTCTTGTAGTCACAAGGGGATTGGCTTATCTTCTAAAACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTGTTGGAGGAATACTACTCGGGCCATCAGCTCTTGGACGGAATAAAAGCTATCTGCATGCAGTTTTCCCACCCAAGAGTCTTACAGTATTAGATACTCTAGCAAACCTTGGCCTTATATTCTTTCTATTTTTAGCCGGCATAGAGTTAGATCCTAAATCTCTGCGAAAAACTGGAGGTCGAGTCCTTGCAATTGCTATTGCCGGAATAAGCTTACCGTTTGCACTAGGAATTGGTTCATCATTTGTACTGCAAGCAACGATTGCTAAAGGTGTAAATACTTCTGCGTTTCTCGTATATATGGGAGTTGCTCTGTCTATAACTGCGTTTCCTGTATTAGCCCGTATTTTGGCCGAGTTAAAACTTCTAACCACTGGTGTCGGCAGAATGGCTATGTCGGCTGCAGCGGTTAATGATGTAGCAGCCTGGGTTCTTCTTGCTCTGGCTGTTGCCTTATCAGGCAATAGCCAATCTCCATTTGTGTCATTGTGGGTTTTCCTAAGTGGGTGTGGTTTTGTCGTTTGTTCAATCCTCATTGCCCTTCCAATTTTCAAATGGATGGCACAACAGTGCCATGAAGGTGAGCCAGTCAATGAGTTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTCACTGATACTATTGGAATTCATGCCATGTTTGGCGCATTCGTTTTTGGAATTTTGATTCCAAAAGATGGACCATTTGCTGGTGCTCTCGTGGAGAAAATAGAGGATCTTGTGTCTGGTCTCTTGCTCCCACTCTATTTTGTGTCTAGTGGATTGAAAACCGACGTAGCCACCATTCAGGGGCTGCAATCATGGGGTCTTCTAGTTTTCGTTACATTTACAGCTTGTTTTGGGAAGATTGTTGGAACTATTGTAGTCTCTCTTTTATGTAAAGTGCCTTTTAATGAGTCTTTAGTGCTTGGATTCTTGATGAACAGTAAAGGCTTGGTCGAACTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAAACCTTTGCAATCATGGTTCTTATGGCTCTCTTTACTACCTTCATGACCACTCCTCTTGTGCTGGCTGCGTATAAGAGGAAGGCAAGAAAATCTGATTACAAATACAGAACAATCGAAAGGAAAAATGCAGACAGCCAACTGAGGATTCTTGCCTGTTTCCATGGTTCAAGGAATATTCCGTCAATGATAAATTTGATTGAGACTTCAAGAGGAATCAGGAAGCATGACGCACTTCGTGTGTATGCTATGCACCTTAAAGAATTTTGCGAGAGGTCCTCATCAATATTAATGGTACAGAAGGTTAGAGAAAATGGGTTGCCGTTTTGGAATAAAGGTCGCTGTGGAGATTCTGTCCATGTTCTTGTGGCGTTTGAGGCTTACCAGAAACTAAGCCAAGTGTATATCCGGCCAATGATAGCAATCTCCTCAATAGCTAACATTCATGAAGACATATGTGCAACTGCTGAAAGAAAGAGAGCTGCAATCATCATTCTCCCATTTCATATGCAACATAGATTAGATGGTTCAGTAGATATTATAAGAAATGATTTTCGATATGTAAACAAAAGGGTACTTGAGCATGCACCATGCTCAGTTGGAATTTTTGTTGATCGCGGGCTTGGTGGTAGATGTCATGTGCCTGCAAGTAATGTTTCCGTTTGCATTGCTGTTCTTTTCTTTGGTGGTGGTGATGACCGCGAAGCTCTTGCTTATGCAGCTCGTATGGCCGAGCACCCTGGAATACGATTAGTGGTTACTCGCTTCTTAGTGGAGCCTAATATTGCAGGTGAGATTACGACAGTTGACATTGGAGACTCTTCTAGCAGTAATTCAATCTCAGAGGATGAGGAATTCCTTGCGGAATTTAAGCTGAAAACAGAAAGTGATGACTCCATTATCTACGAAGAAAAAATAGTAAAAGATGCTATAGAAACAGTCGCTACTATACGCAAGTTTAATTCCTGCAATCTGTTTCTTGTTGGTATAAGGCCAACCGGTCAATTGGTCTGTGCTCTGGAAAGAAGCGAGTGCTCGGAACTAGGACCTATTGGGGGCTTGTTGGCATCCCAAGATTTCCCCACAACAGCATCAGTTTTGGTGATGCAACAGTATCCCAATCGAGTACCAACAAATTCTGGCTCAGAAATGGAGGAACATTCACCTTATGTAGACACAGAATCTTCTTAA 2493 0.4216 MLCYAYQIKYCINKYYTHPCLAGEIRAVEMTSNTTSGNVCSPPMQSTSNGVFQGDNPLDFALPLAILQICLVLVVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLHAVFPPKSLTVLDTLANLGLIFFLFLAGIELDPKSLRKTGGRVLAIAIAGISLPFALGIGSSFVLQATIAKGVNTSAFLVYMGVALSITAFPVLARILAELKLLTTGVGRMAMSAAAVNDVAAWVLLALAVALSGNSQSPFVSLWVFLSGCGFVVCSILIALPIFKWMAQQCHEGEPVNELYICATLAAVLAAGFVTDTIGIHAMFGAFVFGILIPKDGPFAGALVEKIEDLVSGLLLPLYFVSSGLKTDVATIQGLQSWGLLVFVTFTACFGKIVGTIVVSLLCKVPFNESLVLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFMTTPLVLAAYKRKARKSDYKYRTIERKNADSQLRILACFHGSRNIPSMINLIETSRGIRKHDALRVYAMHLKEFCERSSSILMVQKVRENGLPFWNKGRCGDSVHVLVAFEAYQKLSQVYIRPMIAISSIANIHEDICATAERKRAAIIILPFHMQHRLDGSVDIIRNDFRYVNKRVLEHAPCSVGIFVDRGLGGRCHVPASNVSVCIAVLFFGGGDDREALAYAARMAEHPGIRLVVTRFLVEPNIAGEITTVDIGDSSSSNSISEDEEFLAEFKLKTESDDSIIYEEKIVKDAIETVATIRKFNSCNLFLVGIRPTGQLVCALERSECSELGPIGGLLASQDFPTTASVLVMQQYPNRVPTNSGSEMEEHSPYVDTESS* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3898 830 PANTHER CATION/H + ANTIPORTER 36 821 - -
Tpr2g3898 830 Pfam Sodium/hydrogen exchanger family 71 455 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr2g3898 830 Gene3D - 64 468 IPR038770 -
Tpr2g3898 830 PANTHER CATION/H(+) ANTIPORTER 18 36 821 - -
Tpr2g3898 830 MobiDBLite consensus disorder prediction 808 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3898 Tpr-Chr2 41716127 41720602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3898 34 806 Antiporter Super Family AT5G41610 66.667 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3898 - - gmx:100810155 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3898 2 41716127 41720602 Tpr2g3898 2 41716127 41720602 ECH