Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3895 ATGGAACAGAAAGGAATGCTGATATCTGCCTGCGTTGGGGTCGGAGTTGGAGTCGGCCTTGGTTTGGCTTCTGGACAAACCAAATGGGGGCCTAATTCTGTCTCCTCAAACGCCATCACACCCGAGAAAATTGAACACGAAATGCTTCGACTTATTGTTGATGGTAGAGAAAGCAATGTCACTTTTGATAATTTCCCTTATTATCTCAGTGAACAGACACGGGTGCTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCGGAGGTTTCTAAATATACACGGAATCTTGCTCCTGCAAGCCGGACTATTATGCTCTCAGGGCCAGCCGAACTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCCAAGTTGCTTCTGTTCGACGTAACTGACTTTTCATTGAAGATTCAAAGTAGATATGGTTCTTCCAACATAGAAAATTCTTTAAAAAGGTCTACTTCAGAGACAACCTTGGCTCGGTTATCTGACCTATTCGGGTCATTTCCATTCTTTCCACAAAGAGAAGATAATAAAGGCAAATTCCGCAGGCAAAGCAGTGGCGTAGACCTTCGACGAATGGAAGCGGAAGGATCTTCTAATCCTCCTAAGCTTCGTAGGAATGCATCAGCCTCTGGAAATATTAGCAGTCTTGGTTTGCAAAGCAATGCTACAAACTCAGCTACTGGGAAGCACATAGTCAGCTGGTCTTTTGATGAAAAGCTTCTTATACAGACTATTTACAAGGTTTTAGTTTATGTGTCAAAAACCTATCCCATTGTTCTATACCTGCGGGATGTTGATAAGTTGTTGGGTAGATCACAAAGGATAGGTAAACTGTTCCAGACAATGTTAACAAAATTATCTGGACAAATTTTGATTCTTGGTTCGAGGGTTGTGGATTCTGGTAATGACTACAAAGAAGTAGATGATATGCTTACCTCCCTCTTCCCTTACGACATAGAAATCAAACCACCAGAAGATGAATCCCATCTAGTCAGCTGGAAGGCTCAATTTGAAGCGGATATGAAGAAGATACAGATTCAGGACAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTCATGACCTCGATTCCATCCGCGTAGAAGACGCAATGGTTCTCAGTAACTCTATAGAAGAGGTTGTCGTGTCAGCAATTTCTTATCATTTAATGAATAACAAAGAGCCTGAATACAGAAATGGGAAACTGGTTATTCCGTGCAATAGTTTGTCCCATGCTCTCGGTATATTCCAGGAGGGAAAACTCGGTGGAAGAGATACAATGAAATTAGAAGCTCAAGCAGTAACAGCTGAGAGAGAGGAAGCAGCTGCTGTGAAACCAGAAGGAAAGTCTGAAACTTCTGCTCCTGGTGTAAAGACTGAAGCAGAAATACCCGCTTCGGTGGCCAAAACTGACGGGGAAAATTCAGTTCCTGCACCCAAAGTTGAAGTTCCTGATAATGAGTTCGAGAAGCGAATAAGGCCTGAAGTAATACCAGCAAACGAAATAGGGGTAACATTCGCTGATATTGGTGCCTTAGAAGAGACTAAAGAGTCACTTCAAGAACTAGTAATGCTTCCCCTTCGAAGGCCAGACCTTTTTGATGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGTTATTTGGGCCACCTGGCACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAACGAGGCTGGGGCAAGTTTCATTAACGTATCTATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTTCGTGCTTTATTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTGGATAGTATGCTTGGCCAGCGGACAAGAGTTGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCGGACCGCATCCTTGTCCTCGCAGCAACCAATAGGCCCTTTGACCTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGATTATGGTTGGGCTACCATCTGTGGAGAACAGGGAAAATATATTGAGGACCCTTTTGGCTAAAGAGAAGGTGGACGATGGACTTGATTTTAAGGAACTTGCAACTATGACAGAAGGATACAGTGGAAGTGATCTAAAGAACATATGCACAACTGCTGCTTATAGACCTGTTAGAGAGTTAATTCAGCAAGAGATAAAAAAGGATACGGAGAAAAAGAAGAGAGAAGCTGAAGGACAAAATGCTCAGGATGCGGAAGAAGTTGAGCAGGAAAGAGTCATTACCCTTAGACCTTTGAATATGCAGGACTTCAAAGTGGCAAAGAGTCAGGTTGCCGCAAGCTTTGCATCTGAGGGAGCTGGAATGAATGAGTTGAGGCAATGGAATGACTTGTATGGAGAAGGTGGTTCGAGGAAGAAAGAACAACTATCTTATTTCCTATGA 2484 0.4304 MEQKGMLISACVGVGVGVGLGLASGQTKWGPNSVSSNAITPEKIEHEMLRLIVDGRESNVTFDNFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTIMLSGPAELYQQVLAKALAHYFEAKLLLFDVTDFSLKIQSRYGSSNIENSLKRSTSETTLARLSDLFGSFPFFPQREDNKGKFRRQSSGVDLRRMEAEGSSNPPKLRRNASASGNISSLGLQSNATNSATGKHIVSWSFDEKLLIQTIYKVLVYVSKTYPIVLYLRDVDKLLGRSQRIGKLFQTMLTKLSGQILILGSRVVDSGNDYKEVDDMLTSLFPYDIEIKPPEDESHLVSWKAQFEADMKKIQIQDNKNHIMEVLAANDLDCHDLDSIRVEDAMVLSNSIEEVVVSAISYHLMNNKEPEYRNGKLVIPCNSLSHALGIFQEGKLGGRDTMKLEAQAVTAEREEAAAVKPEGKSETSAPGVKTEAEIPASVAKTDGENSVPAPKVEVPDNEFEKRIRPEVIPANEIGVTFADIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENRENILRTLLAKEKVDDGLDFKELATMTEGYSGSDLKNICTTAAYRPVRELIQQEIKKDTEKKKREAEGQNAQDAEEVEQERVITLRPLNMQDFKVAKSQVAASFASEGAGMNELRQWNDLYGEGGSRKKEQLSYFL* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3895 827 SMART AAA_5 100 331 IPR003593 -
Tpr2g3895 827 SMART AAA_5 551 688 IPR003593 -
Tpr2g3895 827 Pfam AAA+ lid domain 709 750 IPR041569 -
Tpr2g3895 827 MobiDBLite consensus disorder prediction 186 212 - -
Tpr2g3895 827 MobiDBLite consensus disorder prediction 449 492 - -
Tpr2g3895 827 CDD AAA 553 686 - -
Tpr2g3895 827 Pfam ATPase family associated with various cellular activities (AAA) 555 685 IPR003959 GO:0005524|GO:0016887
Tpr2g3895 827 Coils Coil 747 767 - -
Tpr2g3895 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 515 754 IPR027417 -
Tpr2g3895 827 MobiDBLite consensus disorder prediction 749 769 - -
Tpr2g3895 827 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 827 - -
Tpr2g3895 827 ProSitePatterns AAA-protein family signature. 658 677 IPR003960 GO:0005524|GO:0016887
Tpr2g3895 827 Gene3D - 687 789 - -
Tpr2g3895 827 Gene3D - 514 797 IPR027417 -
Tpr2g3895 827 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3895 Tpr-Chr2 41696496 41702925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3895 515 745 Calmodulin-binding Proteins AT3G56690 38.462 1.67e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3895 - - gmx:100808011 1291.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3895 2 41696496 41702925 Tpr2g3895 2 41696496 41702925 ECH