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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tpr2g3887
ATGGGCCATCATTCATGCTGCAATCAACAGAAAGTTAAGAGAGGGCTTTGGTCACCTGAGGAAGATGAGAAACTCATCAGATATATTACAACTCATGGTTATGGCTGCTGGAGTGAAGTTCCAGAAAAAGCTGGGCTTCAAAGATGTGGTAAGAGTTGTAGGTTAAGATGGATTAATTATTTAAGGCCTGATATTAGAAGAGGAAGGTTTACACCTGAGGAGGAGAAGTTAATTATAAGCCTACATGGTGTTGTTGGCAACAGATGGGCTCACATTGCAAGCCACTTACCTGGTAGAACGGACAACGAAATAAAAAATTATTGGAATTCATGGATCAAAAAGAAAATTAGAAAGTCTTCTTCTTCTTCATCTATTAATTCATCAATCAATGCACCAAGTGTTGATCATCATCATCATTCCCAGTTCAATTACAATTTCAATCAATTAGATAATTATTTCACCAACCATGAAAATGTAACAACATCAACAACAAAAGAAACCTTATTTTCTTCAACATGTCCTTCATTTATGTTTGACACAAGTTCACTACATGAAACAACATCAACAATAGACACCAATGTAATTATAAGACCAGAAATACTCTTTCATGATACTATGAGTTTGAGTTCTGAAACATGGAACTTGAATCTGAATCATCATCAAGTTCAGGCACTTCCTCCTCATCCTGCATCGACGACAACTTTTACGACCAATATTCATGATTATAATCTGCCACCATTGATAGAGAATAATGTGGAAAATATGATGCAATCTTGTAATATGGATCATGAGGAAGGAGGAGAAATGTTAGAGTTGAATGAATGGGTGGAAAATGAACAACAACAATGTCCTAGCTTTATTTTCAGCTGGGAAAGTGATCAAGAACAAGTACTAGTACCAAACTCATTACCACATATGGGAACAACAAATTCATCATCACTTTCTCCTTTTCCTTCTTCATTAAGAGACAGAAAATTAGGGTTTAGTTGCAGGCTGCTAAGTGATAGAAAAGGGTGCGAGTGTTTTATCGCCGTTCCTCTGTTTACAGCCTCCGCATCGCACATTTCAACCATGATCATTTCAGAGAAGAACCGTAGAGAGATCTCCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGATTACAATTTGGCTAAGCACCCTGAGATTGATGTTCCAAATCTGCAAGTGATTAAGCTTATGCAGAGCTTCAAATCTAGGGAATATGTTAGGGAAACTTTTGCTTGGATGCACTATTACTGGTTTTTGACCAATGATGGAATTGAGTTCCTTAGGACTTATCTCAATCTTCCATCTGAGATTGTTCCAGCTACTTTGAAGAAACAGGCTAAGCCAGCTGGAAGGCCATTTGGCGGTCCACCTGGTGATCGCCCTAGGGGCCCACCTAGATTTGATGGTGAAAGGAGATTCGGTGGTGATCGTGATGGATACCGTGGAGGTCCCAGAGGACCTGGTGGTGAATTTGGAGGAGAGAAAGGCGGAGCACCAGCTGACTACAGACCTTCCTTTGGGGGTCCTGGAGGAAGACCTGGCTTTGGTCGTGGTTCTGGTGGTTTTGGAGCACCAACTAGTTCAAATGATGCTTAA
1614
0.4009
MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSSSSSSINSSINAPSVDHHHHSQFNYNFNQLDNYFTNHENVTTSTTKETLFSSTCPSFMFDTSSLHETTSTIDTNVIIRPEILFHDTMSLSSETWNLNLNHHQVQALPPHPASTTTFTTNIHDYNLPPLIENNVENMMQSCNMDHEEGGEMLELNEWVENEQQQCPSFIFSWESDQEQVLVPNSLPHMGTTNSSSLSPFPSSLRDRKLGFSCRLLSDRKGCECFIAVPLFTASASHISTMIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGEFGGEKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA*
538
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tpr2g3887
537
Gene3D
-
68
140
-
-
Tpr2g3887
537
Gene3D
-
358
461
IPR036388
-
Tpr2g3887
537
Pfam
Myb-like DNA-binding domain
14
61
IPR001005
-
Tpr2g3887
537
Pfam
Myb-like DNA-binding domain
67
111
IPR001005
-
Tpr2g3887
537
PANTHER
40S RIBOSOMAL PROTEIN S10-1-LIKE
275
535
-
-
Tpr2g3887
537
CDD
SANT
17
61
IPR001005
-
Tpr2g3887
537
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
9
61
IPR017930
-
Tpr2g3887
537
MobiDBLite
consensus disorder prediction
448
537
-
-
Tpr2g3887
537
Pfam
Plectin/S10 domain
360
451
IPR005326
-
Tpr2g3887
537
MobiDBLite
consensus disorder prediction
469
485
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tpr2g3887
Tpr-Chr2
41605118
41611241
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tpr2g3887
1
306
MYB Transcription Factor Family
AT1G63910
48.753
3.64e-94
290
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Tpr2g3887
S10_plectin
1.4e-41
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tpr2g3887
K09422
K02947
gmx:100803556
591.267
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Tpr2g3887
2
41605118
41611241
Tpr2g3887
2
41605118
41611241
ECH
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