Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3886 ATGGGTAGCAAAAGCAAAGATAACCATGAGAGAGAACTTAAGAAGGTTTTGACACACAAAGGTCTATATGTTCAATACACTTTGTATGGAAACTTGTTTGAAGTGTCCTCAAAATATGTTCCTCCCCTTCGCCCTATCGGTAGAGGTGCTTATGGAATCGTCTGTGCTGCTGTTAATTCTGATACACATGAGGAAGTTGCTATTAAGAAAATTGGCAATACATTTGACAACATTATTGATGCTAAAAGGACTTTGAGGGAAATTAAGCTCCTTCGTCACATGGATCATGAAAATGTTATTGCTATTAAGGATATTATACGACCTCCACAAAAAGATTCTTTTAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATTATTCGTTCTAATCAACCTCTCAACCTTGATCATTGTCAGTACTTTATGTACCAGCTGTTAAGGGGACTGAAATATGTGCATTCGGCTAATGTCTTGCATCGTGATCTTAAACCAAGTAATTTATTGTTGAATGAAAACTGTGACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACGACATCTGAGACTGATTTTATGACAGAGTATGTCGTTACTAGATGGTACCGAGCACCAGAATTGCTACTTAATTGTTCAGAATACACCTCTGCAATCGATGTTTGGTCGGTTGGTTGCATATTTGCTGAAATTATGACCAAAGAACCCTTGTTTCCTGGTAAAGATTATGTTCATCAACTAAGACTTGTAACTGAGTTAATAGGTTCGCCTGACGATTCGAGCCTTGGATTTCTCCGAAGTGAAAATGCGAGAAGGTATCTTAGACAGCTTCCACAATTCGGGAAGCAAAATTTTTCGGCAAAATTTCCTCATATAGCGGCTGAGCCTCTAGACCTACTAGAAAAAATGCTTATATTTGATCCCGACAAACGAATTACAGTTGATGAGGCACTATGTCACCCATACCTATCATCACTTCATGACATCAATGATGAGCCAGTTACTCCCATGCCATTCAGTTTTGATTTTGAGCAGCCATCTTGCACTGTAGAGCACATTAAGGAGCTTATTTGGAGGGAATCAGTGAAGTTCAATCCGGATCCGGCCTCTCAGTAA 1125 0.3884 MGSKSKDNHERELKKVLTHKGLYVQYTLYGNLFEVSSKYVPPLRPIGRGAYGIVCAAVNSDTHEEVAIKKIGNTFDNIIDAKRTLREIKLLRHMDHENVIAIKDIIRPPQKDSFNDVYIVYELMDTDLHQIIRSNQPLNLDHCQYFMYQLLRGLKYVHSANVLHRDLKPSNLLLNENCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFAEIMTKEPLFPGKDYVHQLRLVTELIGSPDDSSLGFLRSENARRYLRQLPQFGKQNFSAKFPHIAAEPLDLLEKMLIFDPDKRITVDEALCHPYLSSLHDINDEPVTPMPFSFDFEQPSCTVEHIKELIWRESVKFNPDPASQ* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3886 374 SUPERFAMILY Protein kinase-like (PK-like) 43 334 IPR011009 -
Tpr2g3886 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Tpr2g3886 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 16 372 - -
Tpr2g3886 374 Pfam Protein kinase domain 44 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3886 374 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Tpr2g3886 374 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tpr2g3886 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Tpr2g3886 374 SMART serkin_6 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3886 374 CDD STKc_TEY_MAPK 33 369 - -
Tpr2g3886 374 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Tpr2g3886 374 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3886 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3886 Tpr-Chr2 41601129 41603658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3886 14 369 MAP Kinase Gene Family AT4G01370 82.865 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tpr2g3886 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3886 - - gmx:100803024 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3886 2 41601129 41603658 Tpr2g3886 2 41601129 41603658 ECH
Tpr2g3886 2 41601129 41603658 Tpr3g0617 3 6051934 6055658 PCT