Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3867 ATGAAATTTTTAGCTTCATTTTTGGTTCTATATTTGTTTTCAATTCTTTCTCTTGGAGATTCTGATATTCTACCCCCAAATGAAGTTTGGGCACTTACAAGCTTTAAAGAATCAATCTATGAAGACCCAAATCTAGCTTTATCAAATTGGAATATGTTGGAATCAGATCTTTGTAACTGGTTTGGTGTCACATGCACTATGGCTAAAGATCATGTTATCAAGCTAAATATTTCAGGTTCATCATTGAGGGGTTTTCTTGCAAGAGAATTAGGACAAATCACCTATTTGCAAGAATTAATTTTGCATGGGAACAATCTAATAGGAACAATACCTAAAGAATTGTGTGTGTTGAAATCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACGGGACCGATTCCTTCAGAGATTGGAAATTTAACTCAACTTGTGAACATAAATCTTCAGTCCAATGGGTTGACTGGTAGATTACCTTCTGAGTTTGGAAATTTGAGATACCTTCAAGAAGTTCGACTCGATAGGAATAGGCTTCAAGGACCTGTTCCTGCTAGTGGCACTTTCAACTTTGCTTCAAATATGCATGGGATGTATACATCAACCGAAAATGCAACTGGCTTCTGTCGATCGCCTCAGTTAAAAATAGCAGATTTTTCATATAATTTTTTAGTTGGTAGTATACCAAAATGCCTGGAGTTTCTTCCAAGGTCAAGCTTTCAAGGGAACTGCCTCCAGAGCAATGATCTAAACCAGCGTCCTTCCATACAATGTGGTGGTGCTTCACCTGCCAAGAGTCAGCCAGTAAGGGACCACCAAATAGCTGATCATGTACGCAAGCCTCACAGATCATCGAAACCTACTTGGCTTTTGGCTCTAGAAATAGTAGCAGGAACTATGGTCGGTTCTCTCTTTCTGATTGCTACTCTTGCTGCTGTCCAGAGATGCAACAACAAATCATCCATCATTATTCCTTGGAAAAAATCTGCCAGCCAGAAAGATCACACTACAGTATATATAGGTTCAGTTTCTATGTTTTCTACTTTCTATTCGTGTCGAATAGTTTGCAATATCTGTTTTGAACATAAAAATTGGATTGCAGACCCGGATATGTTAAAGGACGTGAGAAGGTATAGCAGACAAGAGCTTGAAGAGGCCTGCGAAGACTTCAGCAACATCATTGGGTCCTCACCGGACAGTGTGGTCTACAAGGGAACCATGAAAGGCGGACCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAGGAACATTGGACAGGATATTTGGAACTCTACTTTCAGAGAGAGGTGGCAGAATTGGCACGGTTAAATCATGAGAATTCTGGAAAACTGCTTGGATATTGTAAAGAGAGCAATCCGTTTTCAAGGATGTTGGTTTTCGACTATGCTTCCAATGGGACACTTCACGAGCACCTACATTGTTATGAAGAAGGATGCCAGTTCTCTTGGACACGGCGTATGAAAATTGTCATAGGAATTGCTCGTGGACTCAAATATTTGCACACAGAAGTTGAACCTCCATTCACTATCTCAGAGCTTAATTCTAGTGCTGTATACCTTACCGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTACTATTAGCAGCCAAGGTGCTGTTTGTGTTCTTCCAAACTCCCTCGAGGCACGTCATCATGATACCAAAGGAAACGTACACGCTTTTGGAGTACTTCTACTAGAGATAATCAGCGGGCGACAGCCATACTGTAAGGAAAAAGGATACTTGGTGGATTGGGCTAAAGACTATCTTGAAAAGCCAGAAGTAATGTCACATTTGGTGAATCCAGAATTGAAAAATTTCAGAGATGATGACCTCAAAGTGATATGCGAGGTGATAACTCTTTGCATCAATCCTGATACAACTGCACGTCCATCTATGCGAGAAATATGCAGCATGCTGGAGAGCAGAATCGACACATCAGTAAGTGTGGATCTCAAGTCATCATCTTTGGCATGGGCTGAACTTGCTCTTTTATCATAG 2061 0.4032 MKFLASFLVLYLFSILSLGDSDILPPNEVWALTSFKESIYEDPNLALSNWNMLESDLCNWFGVTCTMAKDHVIKLNISGSSLRGFLARELGQITYLQELILHGNNLIGTIPKELCVLKSLKVLDLGMNQLTGPIPSEIGNLTQLVNINLQSNGLTGRLPSEFGNLRYLQEVRLDRNRLQGPVPASGTFNFASNMHGMYTSTENATGFCRSPQLKIADFSYNFLVGSIPKCLEFLPRSSFQGNCLQSNDLNQRPSIQCGGASPAKSQPVRDHQIADHVRKPHRSSKPTWLLALEIVAGTMVGSLFLIATLAAVQRCNNKSSIIIPWKKSASQKDHTTVYIGSVSMFSTFYSCRIVCNICFEHKNWIADPDMLKDVRRYSRQELEEACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNHENSGKLLGYCKESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIVIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGTISSQGAVCVLPNSLEARHHDTKGNVHAFGVLLLEIISGRQPYCKEKGYLVDWAKDYLEKPEVMSHLVNPELKNFRDDDLKVICEVITLCINPDTTARPSMREICSMLESRIDTSVSVDLKSSSLAWAELALLS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3867 686 PANTHER PROTEIN MALE DISCOVERER 2 9 684 - -
Tpr2g3867 686 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Tpr2g3867 686 SUPERFAMILY Protein kinase-like (PK-like) 368 661 IPR011009 -
Tpr2g3867 686 Gene3D Transferase(Phosphotransferase) domain 1 469 676 - -
Tpr2g3867 686 ProSiteProfiles Protein kinase domain profile. 387 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3867 686 Gene3D Ribonuclease Inhibitor 141 262 IPR032675 -
Tpr2g3867 686 Pfam Protein tyrosine and serine/threonine kinase 391 660 IPR001245 GO:0004672|GO:0006468
Tpr2g3867 686 Gene3D Phosphorylase Kinase; domain 1 361 468 - -
Tpr2g3867 686 SUPERFAMILY L domain-like 25 235 - -
Tpr2g3867 686 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Tpr2g3867 686 MobiDBLite consensus disorder prediction 258 280 - -
Tpr2g3867 686 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Tpr2g3867 686 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3867 Tpr-Chr2 41452939 41457086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3867 7 666 Receptor kinase-like Gene Family AT2G35620 28.401 7.64e-53 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tpr2g3867 PK_Tyr_Ser-Thr 7.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3867 - - gmx:100792145 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3867 2 41452939 41457086 Tpr2g3867 2 41452939 41457086 ECH
Tpr2g3867 2 41452939 41457086 Tpr3g0661 3 6409833 6414495 PCT