Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3857 ATGGCGACATTACCGGTGGAGCAAACAGGTGAATCGCCGACGGCGGAGTCACAGAGATCAATTCCGACGCCGTTTCTGACGAAAACGTATCAGCTCGTTGATGATCCATCCGTTGATGATTTGGTTTCATGGAATGAAGATGGAACGAGTTTCATAGTTTGGAAACCTGCTGAATTCGCTAGAGATTTGCTTCCAAAGTATTTCAAACACAATAACTTCTCCAGTTTCGTTCGTCAACTCAACACCTATGGATTTCGGAAAGTTGTACCTGACCGTTGGGAATTTGCGAATGACGGTTTCCGACGAGGCGAGAAAAATCTACTCAGGGATATACAGCGGCGGAAAATATTGCCGGCGGCAGGAACAGCCATGGCGACAGCGGTGGCTGCGGCTAATACTGTAACGGTAGCTATGGCTGCACCAGTGAGAATGGTGTCTCCAACAACTTCCGGTGACGAGCAGCTAGAATCTTCAACTAGCGCCCCAACGGCACGAGCTGTGCTTGTAAAGGAAGGAAAAGCGTTGGAGCTTTTGCCAAGGAGTGTTTTGTTAGCTGAGGAACCTGTGGCGGTTAATGCAGGTGGTGCGGCTGGTGGCATGCCATGTGAAATGACGAATTTGGTGGAACCTGAGGTTCGGGCACCTAAGGTTCCCAAGTTGTTTGGGGTTTCTATTGGACTTAAACGATATAGGACGGAGAGTGAGGCCGAACCGGAAAGAGAGGTACGGGTACGGGAACAACATCAAATGCAAACACAATCCTCGCAAGAACCCGATCAAGGATCGGATGTGAAATCTGAATCACTAGATGGCGATGACTCGGATGATCAAGAGCACCGTTGGAATTTGAGGAAATAG 858 0.4895 MATLPVEQTGESPTAESQRSIPTPFLTKTYQLVDDPSVDDLVSWNEDGTSFIVWKPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDGFRRGEKNLLRDIQRRKILPAAGTAMATAVAAANTVTVAMAAPVRMVSPTTSGDEQLESSTSAPTARAVLVKEGKALELLPRSVLLAEEPVAVNAGGAAGGMPCEMTNLVEPEVRAPKVPKLFGVSIGLKRYRTESEAEPEREVRVREQHQMQTQSSQEPDQGSDVKSESLDGDDSDDQEHRWNLRK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3857 285 MobiDBLite consensus disorder prediction 1 20 - -
Tpr2g3857 285 MobiDBLite consensus disorder prediction 263 285 - -
Tpr2g3857 285 MobiDBLite consensus disorder prediction 231 285 - -
Tpr2g3857 285 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2B 213 277 - -
Tpr2g3857 285 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2B 8 149 - -
Tpr2g3857 285 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3857 285 Gene3D - 17 115 IPR036388 -
Tpr2g3857 285 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 149 IPR027725 -
Tpr2g3857 285 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 213 277 IPR027725 -
Tpr2g3857 285 MobiDBLite consensus disorder prediction 231 247 - -
Tpr2g3857 285 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3857 285 MobiDBLite consensus disorder prediction 248 262 - -
Tpr2g3857 285 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3857 285 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3857 285 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3857 285 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g3857 285 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3857 Tpr-Chr2 41378155 41379959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3857 1 233 HSF AT5G62020 43.682 2.07e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr2g3857 HSF_DNA-bind 5.3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3857 K09419 - vvi:100256486 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3857 2 41378155 41379959 Tpr2g3857 2 41378155 41379959 ECH