Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3855 ATGGGCGGCGAGGAGAAAGAAAATTGTGCATATCAAGTTCTAGTGGATCGGCTTCGGATTTTGGAGGAGAAACAAGCCATACTGACGGAGCAGTTCAGTGAGTTGTTGCAGGAGAAGAAGCTCACAGTCAAAGAGAACGAAGATTCAACAGCTGATTTTCTTGCTGGTTTCTTCTTCTTCTCTCAAAGTCCTTATGCTAAAATTTTGAAATGCATAGGGATCTCTGTTTATGTCCACAGTGTTTCCTCCGGCGAGATCACATACTGGAATAATGCAGCAGAAACTCTATATGGATGGAAGGAGCATGAAGTAATTGGACAAAGAATAGCTGATTTCCTAGTTGCTGAGGAATATTATGCATCTCTGCGAAAAATTCTACAACAGTTGATCACAGGAGTGCCATGGTATGGACAGTTTCCTTTCAAGAAGAGGTCTGGTGAAATATTTATGGCATTGGTAACAAAAACTCCTCTTTACGAGGATGGCGTGCTTGTTGGTATTATCAGCGTTTCTAGTGATGCAGCTGTAGTTAACTCTAAGGATTTCGCCAATGGAAGAACTTGCCAATCTCGTGCGAATGACAAACCTGGAACTCAAAGGTTAAAAAGGGTTCAATGGCCTCCACGCCCGCAAATTGCATCATCTGTTTCCAATCTGGCATCAAAGTTTCTTCCACCCCAGCGTACAGATGATTCCGTTTCGAAGAACACTTCAACAGATTCAGATGATGAAAAACAGTGGAAGCCTAGGATTTATGAAACTGAATCTTGTTCCAGAAGTCACCAAAAAGAAAACACAGCTGCCCGAGAACCCAGCACGAAGGATGAGTCTACAACTGAACTTAGTCAACCTTCTAAAATTTTCTGCAGCTTATATGCCCAACTAAATGCAACCACCGTCTTGTTTATGCTTCCCTTTCAAAGTATACTTGTGGAAACTCCTCGGCATGTATTGGAAGCAGCCAAAGTCCTTTCTAAGTTTCGAATCGGGGGAAGTGGAAAATGTAGGAAGGATGCTGGAAGTATTAAAGATAATTGCCCAACTGAAGATAATTCAGGAAGTAATACAGTGAATAATGAAAATGATTTATCTGGAAATTCAGTTGCATTAACCTGGCACCAGGATATTTCTAATGGACAAGATAAAGAAGAAAATCTCCAAAATTGTAATTCTTCATTTGTTGTGAATAATGCAGATGCAAAATTTTCTGCACTTAGAACTTCTAGTGTTTTCAAAGATAGTTCTGCTATACCTTTCTCAGAGAACTATTGTGAATGTTCTGGTTCTCCCTCTTCCAAAGACCCTTTAAGATTACACTGTTCTTTCGATCCAAAGAAATTGGAGTCTAGAGCTACAAATTTGGTAATAGAAGATGAAGTGAAAAAGCAGCAAGAAGGGTTGCAGTTGGCGAGCTCGAAGGAGAGTACAGGTGGCCATGCGATTTCATTAAGCAAAGGGAAAAGTGAATCAAACTCTGTTGTAGAGTGTGAAATCCAATGGAAAGACCTTCAATTAAGAAAGGAGATCGGGCAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGCATCGGATGTTGCCGTCAAGGTTTACTTTGCAAATGGATACACAGAGGAGACTTTACAAGACTACAAAAAAGAGGTTGATATAATGAAAAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAATATATTCTCAGAAAAAGCATGCCATAGTGACAGAATTATTACCTAGGGGAAGTCTTTTCAGAACACTTCACAAGAACAATCAAACATTTGACATCAGACGGCATCTTAGAATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGAGACCTAAAGTCTTCTAACCTGCTTGTTGATAAAAACTGGAATGTCAAGGTTGGAGACTTTGGCCTTTCAAAGTTGAAGGATGCAACTTTACTGACTACCAAATCCGGGAGAGGCACACCTCAATGGATGGCCCCTGAAGTCCTCCGCAGTGAACCTTCAAATGAAAAGTCTGATGTGTTCAGTTATGGTGTCGTCCTTTGGGAAATAATGACTCAATCTATTCCATGGAAAGATTTGAATTCCTTACAGGTTGTTGGAATAGTAGGCTTTATGGATAGAAGACTGGACCTGCCGGAGGGGCTTGACCCCCATGTCGCGTCAATCATAAATGACTGCTGGCAAAGTGATCCAGAACAACGGCCTTCGTTTGAAGAGCTGATACAGAGAATGATGTTGGCTATCAGCAGAGTAACAACTTTGTCATTAAATGGAATTGCCGAATCCTGA 2322 0.4065 MGGEEKENCAYQVLVDRLRILEEKQAILTEQFSELLQEKKLTVKENEDSTADFLAGFFFFSQSPYAKILKCIGISVYVHSVSSGEITYWNNAAETLYGWKEHEVIGQRIADFLVAEEYYASLRKILQQLITGVPWYGQFPFKKRSGEIFMALVTKTPLYEDGVLVGIISVSSDAAVVNSKDFANGRTCQSRANDKPGTQRLKRVQWPPRPQIASSVSNLASKFLPPQRTDDSVSKNTSTDSDDEKQWKPRIYETESCSRSHQKENTAAREPSTKDESTTELSQPSKIFCSLYAQLNATTVLFMLPFQSILVETPRHVLEAAKVLSKFRIGGSGKCRKDAGSIKDNCPTEDNSGSNTVNNENDLSGNSVALTWHQDISNGQDKEENLQNCNSSFVVNNADAKFSALRTSSVFKDSSAIPFSENYCECSGSPSSKDPLRLHCSFDPKKLESRATNLVIEDEVKKQQEGLQLASSKESTGGHAISLSKGKSESNSVVECEIQWKDLQLRKEIGQGSYAVVYHGIWNASDVAVKVYFANGYTEETLQDYKKEVDIMKRLRHPNVLLFMGAIYSQKKHAIVTELLPRGSLFRTLHKNNQTFDIRRHLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWNVKVGDFGLSKLKDATLLTTKSGRGTPQWMAPEVLRSEPSNEKSDVFSYGVVLWEIMTQSIPWKDLNSLQVVGIVGFMDRRLDLPEGLDPHVASIINDCWQSDPEQRPSFEELIQRMMLAISRVTTLSLNGIAES* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3855 773 Pfam Protein tyrosine and serine/threonine kinase 503 754 IPR001245 GO:0004672|GO:0006468
Tpr2g3855 773 MobiDBLite consensus disorder prediction 235 276 - -
Tpr2g3855 773 Pfam PAS domain 81 173 IPR000014 -
Tpr2g3855 773 SUPERFAMILY PYP-like sensor domain (PAS domain) 76 173 IPR035965 -
Tpr2g3855 773 ProSitePatterns Protein kinases ATP-binding region signature. 509 530 IPR017441 GO:0005524
Tpr2g3855 773 CDD PAS 84 173 IPR000014 -
Tpr2g3855 773 SUPERFAMILY Protein kinase-like (PK-like) 492 760 IPR011009 -
Tpr2g3855 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Tpr2g3855 773 ProSiteProfiles Protein kinase domain profile. 503 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3855 773 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 320 759 - -
Tpr2g3855 773 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 14 297 - -
Tpr2g3855 773 Gene3D Transferase(Phosphotransferase) domain 1 582 763 - -
Tpr2g3855 773 ProSiteProfiles PAS repeat profile. 61 133 IPR000014 -
Tpr2g3855 773 TIGRFAM sensory_box: PAS domain S-box protein 82 173 IPR000014 -
Tpr2g3855 773 CDD STKc_MAP3K-like 509 755 - -
Tpr2g3855 773 MobiDBLite consensus disorder prediction 225 280 - -
Tpr2g3855 773 PANTHER SERINE-THREONINE PROTEIN KINASE 14 297 - -
Tpr2g3855 773 PANTHER SERINE-THREONINE PROTEIN KINASE 320 759 - -
Tpr2g3855 773 PRINTS Tyrosine kinase catalytic domain signature 577 590 IPR001245 GO:0004672|GO:0006468
Tpr2g3855 773 PRINTS Tyrosine kinase catalytic domain signature 616 634 IPR001245 GO:0004672|GO:0006468
Tpr2g3855 773 PRINTS Tyrosine kinase catalytic domain signature 663 673 IPR001245 GO:0004672|GO:0006468
Tpr2g3855 773 PRINTS Tyrosine kinase catalytic domain signature 682 704 IPR001245 GO:0004672|GO:0006468
Tpr2g3855 773 PRINTS Tyrosine kinase catalytic domain signature 726 748 IPR001245 GO:0004672|GO:0006468
Tpr2g3855 773 Gene3D Phosphorylase Kinase; domain 1 496 580 - -
Tpr2g3855 773 SMART serkin_6 503 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3855 773 Gene3D PAS domain 78 177 - -
Tpr2g3855 773 SMART pas_2 63 131 IPR000014 -
Tpr2g3855 773 Coils Coil 18 38 - -
Tpr2g3855 773 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3855 Tpr-Chr2 41358669 41366104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3855 496 756 MAP Kinase Kinase Kinase AT4G23050 73.180 2.67e-141 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr2g3855 PK_Tyr_Ser-Thr 7.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3855 - - mtr:MTR_5g010730 1028.47