Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3840 TCGCGTAGATCTCAAATTAGGTTTTATGGTATCGTTCGTGCTTTAACTCAAGATGTTGATGAATTCTACGCACTCTGTGATCCAGATAAGGACAACTTGTGTCTCTATGGACATTCAAATGAATCATGGGAAGTGACTCTTCCCGCAGAGGAAGTTCCACCTGAGCTTCCAGAGCCAGCTCTCGGAATCAATTTTGCAAGGGATGGCATGAACCGTAGGGACTGGCTTTCCTTGGTTGCTGTGCACAGTGATTCATGGTTGCTTTCTGTGGCCTTTTATCTTGGAGCTCGTCTTAACCGCAATGAAAGGAAGCGCTTATTTAGCTTGATCAATGACCTTCCAACTGTGTTTGAAGTTGTAACTGAGAGGAAGCCAATAAAGGACAAACCAACTGTAGACAGTGGAAGCAAATCTCGGGGAAGCACCAAGGTGAATAAGGCTATGAGGAAACGTCGTACAGAGGAGTTAAAGAAACTATATCCTTCGACTGATGTTGAAATGATTAAGGCTGTAACATTTTACGAATTAGCGGTTGATTATCGTGACAACTTTATGGTCGATGGATTATTGAGACTCAATCAATCTTCCATCCTTGGAATTGTTGGCAAGGGTCATTTAAAGGGCATGAAGTGTTATTGGGAAGATAAAACGGGAGTTCAGCAAGACAGTTACAAAAATTTAATGAGTTACTAA 693 0.4185 SRRSQIRFYGIVRALTQDVDEFYALCDPDKDNLCLYGHSNESWEVTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSLINDLPTVFEVVTERKPIKDKPTVDSGSKSRGSTKVNKAMRKRRTEELKKLYPSTDVEMIKAVTFYELAVDYRDNFMVDGLLRLNQSSILGIVGKGHLKGMKCYWEDKTGVQQDSYKNLMSY* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3840 230 PANTHER ZINC FINGER, FYVE/PHD-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE, ALFIN-RELATED 7 155 - -
Tpr2g3840 230 MobiDBLite consensus disorder prediction 128 148 - -
Tpr2g3840 230 Pfam Alfin 6 121 IPR021998 GO:0006355|GO:0042393
Tpr2g3840 230 PANTHER CPG BINDING PROTEIN 7 155 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3840 Tpr-Chr2 41170113 41174894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3840 7 156 Alfin-like Transcription Factor Family AT5G05610 72.848 1.40e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3840 - - gmx:100793126 259.996