Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3837 ATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAAACTCACATCATGGACAAGGTCAACAACTTGTTCCATTTCCAACCACTTCAAGTTCTTTAAGGATTCTACTCTTACATGGTAACTTGGAAATTTGTGTCCATGAAGCCAAAAACCTTCCTAACATGGACATTTTTCATAAGAAAATGGGAGAAATGTTTTCAATCTTGCCTAAAAAACTTGGTGGTAAAATTGAAGGCAAAATGTCTCATAATCTAACAAGTGATCCATATGTAACTGTTTCTGTAGCTGGTGCTGTTATTGCAAGAACTTTTGTCATCAGAAACAATGAAAACCCTGTTTGGAATCAGCATTTTAATGTTCCTGTTGCTCATTTTGCATCAGAGATTCATTTTGTTGTAAAAGACAATGATATTGTTGGTTCACAGGTTATAGGTGCAGTTGGAATTCCAGTTGAAAAGTTATGTAATGGTACAAAAATTGAAGGCTTTTTCCCTATTCTTAATACTAACGGAAAACCGTTTAAGACTGATACAGTTTTGAGCTTATCAATTCAGTATACTCCTGTTGATAAGGTAACTCTTTATAGAAACGGTGTCGGTAATGATTATGAAGGTGTTCCTGGTACATATTTTCCACTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGGTTGTCTTCCTAGTTTGAAGATTGATGGTGGTCATGAGCATGGAGATTGTTGGCATGATATCTTTGATGCAATAAGTCAGGCGCGTCGATTAGTGTATATTGTTGGTTGGTCTGTTTATTACAATGTTAGTCTCATTAGGGATACTAGAGATGGAAGAGATTGTACTTTAGGTGAGGTTCTAAAAGCTAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTGTGGGATGATCCTACTTCTAAAAGCATGCTTGGACATAAAACAGTTGGACTTATGAACACTTACGACGAGGAAACTCGCCATTTTTTCAAGCACTCTTCAGTTAAAGTGCTTCTTTGCCCAAGGGCCGGAGGAAAAGGACATAGCTGGGTCAAACAGCAGGAAGCTGGAACAATCTATACTCATCATCAGAAGACAGTCATTGTGGATGCTGATGCTGGTCAGCATAAAAGAAAGATTGTAGCTTTCATTGGTGGTCTTGATTTATGTCTTGGAAGATATGATACCCCAACACATTCTCTCTTTAGGACTTTGCAGACAACACATAAAGATGACTTTCATAATCCTAACTTTGAGGGTTCTGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCAAAGTTGATGGTCCTGCTGCATATGACATTCTCACCAATTTTGAGGAGCGTTGGTTAAGAGCGTTAAAAATGACTAGACTTCAAAAGATGAAAACTTCACATGATGATTCATTATTGAGAATTGATAGAATCTCTGACATTGTTAGCATTGATGAAGTTCCTAGCCTAGATGAACATAATCAAGAGACTTGGCATGTCCAGATCTTCCGTTCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAAGACCCGAAAGACGCTATACAAAGGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAAGCAATCAGAGCAGCACAGAAGTTCATTTATATCGAGAACCAATATTTTCTAGGATCATCATATAATTGGGATTCATACAAAGACCTCGGTGCAAACAACTTAATTCCAATGGAAATTGCGCTAAAAATAGCCGAAAAAATCAAACAGAAAGAGAGATTCTCTGTGTATATTGTCATTCCTATGTGGCCTGAAGGTGTTCCTTCAAGTAAAGCTACGCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACAATTTACAAGGCTTTAGTAGAGGCTGGACTTGAAAATGAGTATGAACCACAAGACTACTTGAACTTCTTTTGCCTTGGCAATCGGGAGCTCTCCGATAATGAAAACATTTCAAAAACTGTAAAACCTACTAGACAGAACACTCCTCAGGTACTGACTCAAAAGAACAGAAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAACCAGAGATCCATGGAAGGCACTAGAGACACTGAGATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAACAAGGAAATCCAAACCTCATGGGCAGGTGCATGGTTATAGAATGTCACTGTGGAGTGAGCACATAGGAGGTGCGGAAGAATGTTTCAAGCAACCAGAGAGCATTGAATGTGTGAGAAGGATAAGGTCATTGAGTGAGTATAACTGGAGACAATACATGGCTGATGAAGTAACTGAAATGAAAAGTCATTTACTGAAATACCCTCTTGAGGTTGACTCAAAGGGAAAGGTGAAGCCTCTTTTTGGCTGTGAAACATTCCCTGATGTTGGTGGAAACATAAAGGGTACCTTTACTGTACTTCAAGAAAATCTCACCATCTGA 2550 0.3824 MAHLVYGETPSFGNSHHGQGQQLVPFPTTSSSLRILLLHGNLEICVHEAKNLPNMDIFHKKMGEMFSILPKKLGGKIEGKMSHNLTSDPYVTVSVAGAVIARTFVIRNNENPVWNQHFNVPVAHFASEIHFVVKDNDIVGSQVIGAVGIPVEKLCNGTKIEGFFPILNTNGKPFKTDTVLSLSIQYTPVDKVTLYRNGVGNDYEGVPGTYFPLRKGGKVTLYQDAHVPQGCLPSLKIDGGHEHGDCWHDIFDAISQARRLVYIVGWSVYYNVSLIRDTRDGRDCTLGEVLKAKSQEGVRVLLLVWDDPTSKSMLGHKTVGLMNTYDEETRHFFKHSSVKVLLCPRAGGKGHSWVKQQEAGTIYTHHQKTVIVDADAGQHKRKIVAFIGGLDLCLGRYDTPTHSLFRTLQTTHKDDFHNPNFEGSVTGCPRQPWHDLHSKVDGPAAYDILTNFEERWLRALKMTRLQKMKTSHDDSLLRIDRISDIVSIDEVPSLDEHNQETWHVQIFRSIDSNSVKGFPKDPKDAIQRNLVCGKNVMIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIAEKIKQKERFSVYIVIPMWPEGVPSSKATQRILFWQFKTMQMMYETIYKALVEAGLENEYEPQDYLNFFCLGNRELSDNENISKTVKPTRQNTPQVLTQKNRRFMIYVHSKGMIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWATRKSKPHGQVHGYRMSLWSEHIGGAEECFKQPESIECVRRIRSLSEYNWRQYMADEVTEMKSHLLKYPLEVDSKGKVKPLFGCETFPDVGGNIKGTFTVLQENLTI* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3837 849 Pfam C2 domain 40 166 IPR000008 -
Tpr2g3837 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Tpr2g3837 849 PIRSF PLD_plant 27 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Tpr2g3837 849 Pfam Phospholipase D Active site motif 362 396 IPR001736 GO:0003824
Tpr2g3837 849 Pfam PLD-like domain 548 731 IPR025202 -
Tpr2g3837 849 Gene3D Endonuclease Chain A 503 748 - -
Tpr2g3837 849 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 849 - -
Tpr2g3837 849 SUPERFAMILY Phospholipase D/nuclease 542 779 - -
Tpr2g3837 849 Gene3D C2 domain 35 179 IPR035892 -
Tpr2g3837 849 Gene3D Endonuclease Chain A 234 480 - -
Tpr2g3837 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Tpr2g3837 849 CDD C2_plant_PLD 36 187 - -
Tpr2g3837 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 361 396 IPR001736 GO:0003824
Tpr2g3837 849 Pfam Phospholipase D C terminal 769 839 IPR024632 -
Tpr2g3837 849 PANTHER PHOSPHOLIPASE D 8 849 IPR015679 -
Tpr2g3837 849 SMART pld_4 361 396 IPR001736 GO:0003824
Tpr2g3837 849 SMART pld_4 695 722 IPR001736 GO:0003824
Tpr2g3837 849 ProSiteProfiles C2 domain profile. 23 164 IPR000008 -
Tpr2g3837 849 SMART C2_3c 41 163 IPR000008 -
Tpr2g3837 849 SUPERFAMILY Phospholipase D/nuclease 203 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3837 Tpr-Chr2 41137401 41142476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3837 15 849 Phospholipase D Gene Family (Wang group) AT2G42010 68.324 0.0 1263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3837 K01115 - gmx:100786241 1506.5