Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3835 ATGAGTTGGGTTCGTGGTCACTCCTTAGGTAGCGGAAGCTTTGCTACTGTTCATTTAGCCAAACACACAAAAGACTCTCATAAATTTCCATCTCTCACTGCCGTCAAATCATGTGTTCTTGACAATTGTTTTACTCTACAAAACGAAAAGCATGTACTTGATCAGTTAGATTCATCTCCACATATTATTAAGTGTTTTGGTCACGATCAAACATTTGAAAACGGCCAAGAATATTATAATCTTTTTCTCGAATACGCCACCGGTGGAACTCTTAATGATCAACTCTATAATTATGGTGGTAAGTTCCCGGAGAAACTTGTTCGTCGTTACACTAGGTCTATTGTTGAAGGACTCAAGTACATCCACGAAAAAGGTTTTGTTCACTGCGACTTGAAGTTACCAAACATTCTCGTGTTTGACAATGACAACGTTAAGATTTCAGATTTTGGTCTTGCGAAAGAGAAAGGGGTTGTTGATACGCGGCAATGTAGGGGAACTCCAATGTTTATGTCACCAGAAGCGATAAATGACAATGTGCATGAGTCGCCAGCAGATATATGGGCTCTTGGTTGTGCCGTCGTGGAGATGATTACTGGAGAACCTGTGTGGAAAAATGAAACAGATATGTGGATGTTGTTCACTCGTATTGTGATAAGAGAAGAAAAACCATTGATTCCAGATGAATTATCACGCGAAGGGAAAGATTTTCTTGACAAGTGTTTTGCTATGGATCCTTTGAAAAGATGGAGTGCAGATATGCTTTTGAAACACCCTTTTATCTCCGAAGATGAAAATGTTTCTCCAATGAAAGTGTTTACTAATGAGTTGTCTTTTTCATCATCGTCTCCAAGAACTCACTTCGATTATTCTCTAATACTAGTATTTGTATTATTAGTATTATTATTATTATGTTTTAAGAGTGATCTGGCATCACAGTTCCTTCAAATTTAA 951 0.3764 MSWVRGHSLGSGSFATVHLAKHTKDSHKFPSLTAVKSCVLDNCFTLQNEKHVLDQLDSSPHIIKCFGHDQTFENGQEYYNLFLEYATGGTLNDQLYNYGGKFPEKLVRRYTRSIVEGLKYIHEKGFVHCDLKLPNILVFDNDNVKISDFGLAKEKGVVDTRQCRGTPMFMSPEAINDNVHESPADIWALGCAVVEMITGEPVWKNETDMWMLFTRIVIREEKPLIPDELSREGKDFLDKCFAMDPLKRWSADMLLKHPFISEDENVSPMKVFTNELSFSSSSPRTHFDYSLILVFVLLVLLLLCFKSDLASQFLQI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3835 316 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Tpr2g3835 316 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 290 - -
Tpr2g3835 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Tpr2g3835 316 Gene3D Transferase(Phosphotransferase) domain 1 2 294 - -
Tpr2g3835 316 SMART serkin_6 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3835 316 SUPERFAMILY Protein kinase-like (PK-like) 3 287 IPR011009 -
Tpr2g3835 316 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 290 - -
Tpr2g3835 316 ProSiteProfiles Protein kinase domain profile. 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3835 316 Pfam Protein kinase domain 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3835 316 CDD STKc_MAPKKK 2 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3835 Tpr-Chr2 41121786 41123885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3835 1 289 MAP Kinase Kinase Kinase AT4G36950 49.660 2.19e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr2g3835 Pkinase 6.5e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3835 - - mtr:MTR_5g017140 416.772