Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3825 ATGATAAAAACCAACCACACAATGAAGCTTGCATTGGTTGTTGGTCTCATTTTCATTCTCTGCAGCATCAACCAAATTACATCAGTACTTGCTGCTGCAGAGGTGAATCAAGAACATGATCAAAATTTAATGACATACATTGTTCATGTCAAAAAATCAGATAATGTTGCTTCTTTTCAATCCGAAGATTTCCATAACTGGTACCATTCATTTCTCCCACAAACTTTTCCTCACAAAGAGAGAATGGTTTTCACTTACCGCAACGTAGCCTCTGGATTCGCCGTGAAGCTTACACCAGAAGAAGCCAAATCTCTTCAAGAAAAAGGTGAAGTTGTGTCAGCAAGACCTGAAAGAACACTTTCATTACACACAACTCATACTCCAACTTTCTTAGGGTTAAAACAAGGACAAGGATTGTGGAGCGATGATAACCTCGGAAAAGGCGTAATAATTGGACTCATAGACACCGGAATATACCCTTTTCATCCATCATTCAACGACGAAGGAATGCCGCCGCCACCCGCAAAATGGAAAGGCCACTGTGAATTCACTGGTGGCACAACATGCAACAATAAGCTCATAGGTGCAAGAAATCTAGACAAAAGCGCAATTCAAGAGCCTCCATTTGAAACCTTAATATTCCATGGAACACACACTGCTGCAGAGGCAGCAGGAAGATTCATAGAAGATGCAAGTGTTTTCGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTGCTAGTGGCACTCGAGAATGCTACGAAAGTTCTATCTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTCCTTTCACTCTCTCTTGGTTTGGATTCTAATGTTCCATTTTTTGAAGACCCTATTGCAATTGGTGCATTTGCTGCTACACAAAAAGGAGTTTTTGTTAGTTGTTCTGCTGCAAACTCCGGCCCTGAATACAGCACTCTCGCAAATGAAGCTCCTTGGATACTCACAGTAGGTGCAAGCACAATTGATCGAAAAATTGTAGCATCAGCTAAAATAGGAAATGGAGATGAATTTGAAGGTGAAACATTATTCCAACCCAAAGACTTTCCTCAACAATTATTGCCACTTGTGTATGCAGGTTCAAATGGTATTTCAAGCCAGAACCAGAATCAGTCCTTCTGTCTTCCAGATTCCTTAAAGAACATTGATGTAAGAGGCAAAGTAGTGTTGTGTGATATAGGTGGAGGTGTTTCAAGTGTTGTCAAAGGACAAGAAGTTCTAAATTCAGGCGGTGTGGCCATGATCCTTGCAAACTCAGAAGCTACTGGATTCAGTACATTTGCTATCGCGCATGTTCTGCCGGCTGTTGATGTGAGTTATGCAGCTGGTTTAATAATCAAAGATTACATAAACTCAACCTACAATCCAACCGCAACAGTACTATTCAAAGGAACCGTAATCGGTGATTCACTTGCTCCTTCTGTTGTTTCATTTTCTTCAAGAGGACCAAGTCAAGAAAGTCCTGGAATTCTAAAACCAGACATCATAGGACCAGGTGTCAACATTCTAGCTGCTTGGGCTATTTCTGTAGACAACGAACTCCCACCTTATAACATTGTTTCCGGTACTTCAATGTCTTGTCCTCATCTTAGTGGTATTGCTGCATTGATTAAAAGCTCTCACCCTGATTGGTCACCGGCCGCTATAAAATCGGCAATCATGACAACTGCTAATACTCTCAACCTCGGCGGTACTCCTATAACGGATCAAAGACTTTTACCTGCTGATGTTTTCGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCTAATGATCCTGGTCTTGTTTATGATATTCAACCGGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATTCTGATAAAGAGATTGGAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTGATGTGAAAAGTATACCAGAAGCACAACTGAACTATCCGTCTTTTTCGATTCTGTTGGGGTCTGAGTCACAGTTTTATACAAGAACTTTGACTAATGTTGGACCAGTGAATGCTACTTATAGAGTTGAACTGGAAGTGCCTTTGGCTTTAGGTATGAGTGTTAATCCTAGTGTGATAACATTTAGTGAGATTAATGAGAAGATTAGTTACTCGGTCGATTTTTTACCGCAAGTCAAAGAAAATCGAGGTAACCATACTTTTGCTCAGGGTTCTCTCACTTGGATATCTGATAAACATGCTGTCAGGATCCCCATATCTGTGATTTTCAAGTGA 2283 0.406 MIKTNHTMKLALVVGLIFILCSINQITSVLAAAEVNQEHDQNLMTYIVHVKKSDNVASFQSEDFHNWYHSFLPQTFPHKERMVFTYRNVASGFAVKLTPEEAKSLQEKGEVVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGLIDTGIYPFHPSFNDEGMPPPPAKWKGHCEFTGGTTCNNKLIGARNLDKSAIQEPPFETLIFHGTHTAAEAAGRFIEDASVFGNAKGVAAGMAPNAHIAMYKVCASGTRECYESSILAAMDIAIEDGVDVLSLSLGLDSNVPFFEDPIAIGAFAATQKGVFVSCSAANSGPEYSTLANEAPWILTVGASTIDRKIVASAKIGNGDEFEGETLFQPKDFPQQLLPLVYAGSNGISSQNQNQSFCLPDSLKNIDVRGKVVLCDIGGGVSSVVKGQEVLNSGGVAMILANSEATGFSTFAIAHVLPAVDVSYAAGLIIKDYINSTYNPTATVLFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNELPPYNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGTPITDQRLLPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYSDKEIGVIVQWKVKCSDVKSIPEAQLNYPSFSILLGSESQFYTRTLTNVGPVNATYRVELEVPLALGMSVNPSVITFSEINEKISYSVDFLPQVKENRGNHTFAQGSLTWISDKHAVRIPISVIFK* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3825 760 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 151 162 IPR023827 -
Tpr2g3825 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 123 IPR037045 -
Tpr2g3825 760 Pfam Fibronectin type-III domain 659 757 IPR041469 -
Tpr2g3825 760 Gene3D - 629 759 - -
Tpr2g3825 760 Pfam PA domain 376 465 IPR003137 -
Tpr2g3825 760 Pfam Peptidase inhibitor I9 45 123 IPR010259 -
Tpr2g3825 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 759 IPR045051 -
Tpr2g3825 760 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Tpr2g3825 760 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Tpr2g3825 760 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Tpr2g3825 760 Gene3D Peptidase S8/S53 domain 148 625 IPR036852 GO:0004252|GO:0006508
Tpr2g3825 760 SUPERFAMILY Subtilisin-like 122 616 IPR036852 GO:0004252|GO:0006508
Tpr2g3825 760 CDD Peptidases_S8_3 122 579 IPR034197 -
Tpr2g3825 760 Pfam Subtilase family 146 585 IPR000209 GO:0006508|GO:0008236
Tpr2g3825 760 CDD PA_subtilisin_like 352 481 - -
Tpr2g3825 760 Gene3D - 344 489 - -
Tpr2g3825 760 ProSiteProfiles Serine proteases, subtilase domain profile. 130 612 - -
Tpr2g3825 760 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3825 Tpr-Chr2 41056581 41058904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3825 18 760 Subtilisin-like Serine Gene Family AT1G04110 42.694 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3825 - - gmx:100783595 1153.66