LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g3822	ATGGTACTCATAGCATCTCTAAGTCTTTTTAATTTGGGGTATGCGAGCGTGATTGGCCTAAGTGAGCGACAACTAGCCATGACTGCTCTATCAGTGAGCATATCCAGGACACGATCGAGTGCATCATTTGTGAAGAAGATATCAAAAGCAAGAGGCATCAAACCAAGGGAGTACATAGCCATTCAAGACTGCATAGAAAACATGGGTGACAGTTTGGACAGTCTTAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGATTTCGTTTGGCACATGAGCAACGTGCAAACTTGGGTCAGTGCTGCCCTTACTGATGATAACACTTGTCTTGATGGCTTTTCTGGTCCTTCCATGAAGGGAAATGTCAAGGCTGCCATCAAGAATAGAGTTGTCAATGTTACTCAAATTACAAGCAACGCACTCGCTTTGGTCAATCGCTTTGCCTCGATTCATCGAACTGTTGAAACTCCTTAA	489	0.4438	MVLIASLSLFNLGYASVIGLSERQLAMTALSVSISRTRSSASFVKKISKARGIKPREYIAIQDCIENMGDSLDSLSQSVRELGSIGHAVGEDFVWHMSNVQTWVSAALTDDNTCLDGFSGPSMKGNVKAAIKNRVVNVTQITSNALALVNRFASIHRTVETP*	163

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g3822	162	Pfam	Plant invertase/pectin methylesterase inhibitor	22	148	IPR006501	GO:0004857
	Tpr2g3822	162	PANTHER	PECTINESTERASE INHIBITOR 9	13	156	-	-
	Tpr2g3822	162	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	18	153	IPR035513	-
	Tpr2g3822	162	SMART	PMEI_2	5	148	IPR006501	GO:0004857
	Tpr2g3822	162	CDD	PMEI-like_3	14	154	-	-
	Tpr2g3822	162	Gene3D	Invertase/pectin methylesterase inhibitor family protein	6	152	IPR035513	-
	Tpr2g3822	162	PANTHER	PECTINESTERASE INHIBITOR-LIKE	13	156	-	-
	Tpr2g3822	162	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	15	150	IPR006501	GO:0004857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g3822	Tpr-Chr2	41045118	41045785	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g3822	21	149	Carbohydrate Esterase	AT3G14310	30.769	7.94e-17	74.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g3822	-		-	mtr:MTR_5g012000	263.077

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