Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3822 ATGGTACTCATAGCATCTCTAAGTCTTTTTAATTTGGGGTATGCGAGCGTGATTGGCCTAAGTGAGCGACAACTAGCCATGACTGCTCTATCAGTGAGCATATCCAGGACACGATCGAGTGCATCATTTGTGAAGAAGATATCAAAAGCAAGAGGCATCAAACCAAGGGAGTACATAGCCATTCAAGACTGCATAGAAAACATGGGTGACAGTTTGGACAGTCTTAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGATTTCGTTTGGCACATGAGCAACGTGCAAACTTGGGTCAGTGCTGCCCTTACTGATGATAACACTTGTCTTGATGGCTTTTCTGGTCCTTCCATGAAGGGAAATGTCAAGGCTGCCATCAAGAATAGAGTTGTCAATGTTACTCAAATTACAAGCAACGCACTCGCTTTGGTCAATCGCTTTGCCTCGATTCATCGAACTGTTGAAACTCCTTAA 489 0.4438 MVLIASLSLFNLGYASVIGLSERQLAMTALSVSISRTRSSASFVKKISKARGIKPREYIAIQDCIENMGDSLDSLSQSVRELGSIGHAVGEDFVWHMSNVQTWVSAALTDDNTCLDGFSGPSMKGNVKAAIKNRVVNVTQITSNALALVNRFASIHRTVETP* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3822 162 Pfam Plant invertase/pectin methylesterase inhibitor 22 148 IPR006501 GO:0004857
Tpr2g3822 162 PANTHER PECTINESTERASE INHIBITOR 9 13 156 - -
Tpr2g3822 162 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 18 153 IPR035513 -
Tpr2g3822 162 SMART PMEI_2 5 148 IPR006501 GO:0004857
Tpr2g3822 162 CDD PMEI-like_3 14 154 - -
Tpr2g3822 162 Gene3D Invertase/pectin methylesterase inhibitor family protein 6 152 IPR035513 -
Tpr2g3822 162 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 156 - -
Tpr2g3822 162 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 150 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3822 Tpr-Chr2 41045118 41045785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3822 21 149 Carbohydrate Esterase AT3G14310 30.769 7.94e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3822 - - mtr:MTR_5g012000 263.077