Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3821 ATGAATGATTTCTTACCACTTCCTCGTGGAGTAATCTTCAAACCCACCGATGAACAACTTATTGAGCACTACCTTAAGAATAAAATTGCTTCTGAAAAGATGGATTTTGATTTCATAGATCTTGATCTCAATGAAATTGAGCCATGGGATATACCAGAATTATGCAATATAGGATTTGGTGATAGACAAATAGGATGGTATTTTTTCGGTCGAAAAGACAAGTTTTCAGTTAGTAGGAATCATACATATATAACTACAAAAGCAGGATACTGGAGAGCAGAAGGAACTGGCTGTGCAATCTACTCTGATGATGAGAATGACCATAATAGTCTCATTGGAATGAAAAAGCCTCTAGCCTTCTTTCAAGGAAGGGAACCTAATGGACTATTAAGTCAATGGTTCATGTTTGAGTACCGCTTAGAAACTAATGAAGATGAAAGTGGCACTCTTCTTCAGGCTCAGGAAGAAAGTTGGGTTTTATATAAAATGTTCAAGGAACCATTATTGCAAAAATTACTATTGCTCGAGAATCAACTTAGGCCATTGCTCAAGGGTTTACCGGCTGCAACAGTGGAGGAGAGCAATCAAAGGATTGGCCAGTACTAG 606 0.3779 MNDFLPLPRGVIFKPTDEQLIEHYLKNKIASEKMDFDFIDLDLNEIEPWDIPELCNIGFGDRQIGWYFFGRKDKFSVSRNHTYITTKAGYWRAEGTGCAIYSDDENDHNSLIGMKKPLAFFQGREPNGLLSQWFMFEYRLETNEDESGTLLQAQEESWVLYKMFKEPLLQKLLLLENQLRPLLKGLPAATVEESNQRIGQY* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3821 201 Pfam No apical meristem (NAM) protein 8 140 IPR003441 GO:0003677|GO:0006355
Tpr2g3821 201 PANTHER NAC TRANSCRIPTION FACTOR PPVNS5 5 166 - -
Tpr2g3821 201 SUPERFAMILY NAC domain 4 166 IPR036093 GO:0003677|GO:0006355
Tpr2g3821 201 ProSiteProfiles NAC domain profile. 7 166 IPR003441 GO:0003677|GO:0006355
Tpr2g3821 201 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 166 - -
Tpr2g3821 201 Gene3D NAC domain 16 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3821 Tpr-Chr2 41041351 41042356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3821 1 168 NAC Transcription Factor Family AT1G12260 50.296 1.50e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g3821 NAM 2.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3821 - - thj:104818454 161.384