Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3819 ATGAGAACACTGTGTCAAATTCATCTTTCTCATGCTCTATTCATTCCCATTTTCTGTTTGTTTTGGTCTATTGCAACTGTTTCACCAGCAACTGAGAAAGAGATTTTACTTCAATTCAAGGGTAACATCACAGAGGATCCATACAATACATTGAGTTCATGGGTTTCAAGTGGAGACCCTTGTCAAAATTACAAAGGTATTTTCTGTAACATTGAAGGATTTGTAGAAAGAATAGTGCTTTGGAACACTAGCTTAGGTGGTGTGTTGTCACCAGCACTCTCAGGGTTGAAGAGGTTGAGGACATTGACATTGTTTGGAAATCGATTTTCGGGTAATATCCCAGATGATTATGCTGAACTTAAGTCATTGTGGAAGATCAATGTGAGTTCCAATGTGTTATCCGGTTCGATACCGGATTTTATTGGTGATTTGCCTAACATTCGGTTTCTAGATTTATCAAAGAATGGTTTTATTGGAGAGATACCTTCTGCTTTGTTTAGGTACTGTTACAAAACTAAGTTTGTTTCTCTTTCTCATAACAATCTTGTTGGTTCAATTCCTTTATCTCTGGTGAATTGCATAAACCTTGAAGGCTTTGATTTTTCTTTCAATAATCTTAGTGGTGTTGTCCCTTCTAGAATCTGTGATATTCCTATGTTATCATATGTATCTCTGAGAAGCAATGCCTTATCAGGGAGTGTGAAAGAGTACATTTCTGCATGCCATAGTCTAATGCATTTGGATTTTGGTAGTAATAGATTTACTGATTTGGCTCCATTCAGCATCCTTGGAATGCAAAATCTTACCTATTTCAATATATCCTATAATGGGTTTGAAGGTCAAATTCCTGATATGACTTCATGTAGTGAGAGATTAGAGATCTGTGATGCTTCGGGGAATAATTTGGATGGGGTGATTCCATCCAGCATAACTAGATGCAAGAACCTAAAACTCTTGTCATTGGAGTTGAATAGGCTGAAGGGGAGTATCCCGGCTGATATTCAGGAGTTGCGAGGGCTATTGGTTATCAAACTGGGCAATAACTCGATAGGCGGAATGATTCCTGAGGGGTTCGGCAACATTGAGCTGCTTGAATTGCTGGATTTGAGCAACCTAAACCTCACTGGCGAAATTCCGGTTGACATAACAAATTGCAAGTTTCTTCTTGAGCTGGATGTCTCTGGTAATAACTTAGATGGTGAGATTCCTCCGGCCATTTACAAAATGACAAATCTTGAAGCCCTTGACCTACGTTATAACCAGCTTAAGGGAAGCATCCCCTCAAGCCTAGGAAACCTGTCAAGGATCCAATACCTAGATCTATCACATAATTCACTTGCTGGTTCAATCCCTCCTTCTCTTGGAGATTTAAATAACTTGACACATTTTGATCTCTCATTCAACAATCTCTCTGGTGTCATTCCTGATATTGCAACCATACAGCATTTTGGTGCACCTGCATTTTCCAATAATCCTTTCCTCTGTGGCGCTCCTTTGGAAACCACTTGCTCAATAAACGGAACTAGATCATCGTCTTCACCTCCTGGGAAGACTAAAATTCTCAGCGTCTCTGCAATTATTGCCATTGTTGCTGCAGCTGTCATTCTTACTGGGGTTTGTTTGGTGACCATCATGAGTATTAGAGCCCAACGTAGAAAAAAGGACAATGATCAGATTATGATTATTGATGAGAGTACACCTCTAGGATCAAGATCAACAGAATCAAATGTTATAATTGGAAAGTTGGTTCTCTTCAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGCACTAAAGCATTGCTTGATAAAGAGTCTTTGATAGGTGGTGGATCGATTGGTACAGTCTACAAAACCGATTTTGAAGGTGGCATCTCAATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCAGAAATCAGGAGGAATTCGAAAACGAAATCGGGAGACTAGGTAACATTCAACACCATAATTTAGTTGCCTTTCAAGGTTACTACTGGTCCTCTTCAATGCAATTGATTTTGTCAGAGTTTGTTTCAAATGGGAATCTTTATGATAATCTACACGGGCATGGTTATCCTGGAACAAGCACAAGTAGAGGTAATAGGGAATTAGATTGGTCTAGAAGGTTCCAAATTGCACTTGGAACTGCAAGAGCCCTTGCCTATCTCCACCACGACTGTCGACCTCCGATCCTTCACCTCAACCTTAAATCCTCTAATATTCTCTTAAATGACAAGTATGAAGCCAAGTTATCTGATTTTGGATTAGGAAAGTTGTTACCGATTTTGGATAATTACGGTTTGACCAAGTTCCACAATGCTGTTGGTTATGTTGCACCAGAGTTAGCTCAAAGCTTTAGGCAGAGTGAGAAGTGTGATGTTTATAGTTTCGGAGTCATTCTTTTGGAGCTGGTTACAGGGAGGAAGCCTGTAGAAAGTCCAACCACAAGTGAGGTTGTGGTTTTGTGTGAATATGTGAGAGGCCTGTTGGAGACTGGCTCGGCTTCACATTGTTTTGATAGAAATTTACTGGGATTTACTGAGAGTGAATTGATTCAGGTTATGAGATTGGGGATAATATGTACTTCGGAGGATCCTTTAAGGAGACCAAGCATGGATGAGATTGTTCAGGTCCTTGAGTCCATCAGAAATGGATTGGAATCTCATTAA 2679 0.3983 MRTLCQIHLSHALFIPIFCLFWSIATVSPATEKEILLQFKGNITEDPYNTLSSWVSSGDPCQNYKGIFCNIEGFVERIVLWNTSLGGVLSPALSGLKRLRTLTLFGNRFSGNIPDDYAELKSLWKINVSSNVLSGSIPDFIGDLPNIRFLDLSKNGFIGEIPSALFRYCYKTKFVSLSHNNLVGSIPLSLVNCINLEGFDFSFNNLSGVVPSRICDIPMLSYVSLRSNALSGSVKEYISACHSLMHLDFGSNRFTDLAPFSILGMQNLTYFNISYNGFEGQIPDMTSCSERLEICDASGNNLDGVIPSSITRCKNLKLLSLELNRLKGSIPADIQELRGLLVIKLGNNSIGGMIPEGFGNIELLELLDLSNLNLTGEIPVDITNCKFLLELDVSGNNLDGEIPPAIYKMTNLEALDLRYNQLKGSIPSSLGNLSRIQYLDLSHNSLAGSIPPSLGDLNNLTHFDLSFNNLSGVIPDIATIQHFGAPAFSNNPFLCGAPLETTCSINGTRSSSSPPGKTKILSVSAIIAIVAAAVILTGVCLVTIMSIRAQRRKKDNDQIMIIDESTPLGSRSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGGGSIGTVYKTDFEGGISIAVKKLETLGRIRNQEEFENEIGRLGNIQHHNLVAFQGYYWSSSMQLILSEFVSNGNLYDNLHGHGYPGTSTSRGNRELDWSRRFQIALGTARALAYLHHDCRPPILHLNLKSSNILLNDKYEAKLSDFGLGKLLPILDNYGLTKFHNAVGYVAPELAQSFRQSEKCDVYSFGVILLELVTGRKPVESPTTSEVVVLCEYVRGLLETGSASHCFDRNLLGFTESELIQVMRLGIICTSEDPLRRPSMDEIVQVLESIRNGLESH* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3819 892 SUPERFAMILY L domain-like 166 495 - -
Tpr2g3819 892 CDD STKc_IRAK 610 885 - -
Tpr2g3819 892 Gene3D Ribonuclease Inhibitor 29 168 IPR032675 -
Tpr2g3819 892 SUPERFAMILY Protein kinase-like (PK-like) 605 883 IPR011009 -
Tpr2g3819 892 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Tpr2g3819 892 Gene3D Transferase(Phosphotransferase) domain 1 681 891 - -
Tpr2g3819 892 Gene3D Phosphorylase Kinase; domain 1 571 680 - -
Tpr2g3819 892 PANTHER UNNAMED PRODUCT 12 891 - -
Tpr2g3819 892 Pfam Leucine rich repeat 390 446 IPR001611 GO:0005515
Tpr2g3819 892 Gene3D Ribonuclease Inhibitor 169 506 IPR032675 -
Tpr2g3819 892 Pfam Protein kinase domain 606 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3819 892 ProSiteProfiles Protein kinase domain profile. 604 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3819 892 SUPERFAMILY L domain-like 76 211 - -
Tpr2g3819 892 SMART LRR_typ_2 144 168 IPR003591 -
Tpr2g3819 892 SMART LRR_typ_2 409 432 IPR003591 -
Tpr2g3819 892 SMART LRR_typ_2 433 457 IPR003591 -
Tpr2g3819 892 SMART LRR_typ_2 337 360 IPR003591 -
Tpr2g3819 892 PANTHER - 12 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3819 Tpr-Chr2 41030938 41034514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3819 13 891 Receptor kinase-like Gene Family AT1G62950 63.698 0.0 1102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Tpr2g3819 Pkinase 3.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3819 - - mtr:MTR_5g011410 1588.55