Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3813 ATGGATCAAATAACAGCACATGGACATTCACTTCCTCCACCTTTCCACACAGCAAGAGATCTTCATCTTCATCATCAACACCAACAGCAGCAGCAGCAACAACAACAACAACACCACCAATTCCATACTTTACAACAGCAACCAGATCAAGATGAACAAAGCGGCAGCAGCAGCGGTGGCGGCCTCAACCTCACAAACCGCGAAGAAAACAGCCACAACAAGTTCAACAATGATTTTAGCCCCAAGTTAGAATCAGGAGGAGGAGGAGGAGGAGGAGGTTCCGGCGGTGACACCGATTCAATGACAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAAAACAAACCAAAACCACCGATCATCATCACACGAGATAGCGCGAACGCGCTAAAAACTCATGTGATGGAAGTTGCAGATGGTTGTGATGTGGTTGAAAGTGTTAACAATTTTGCTAGACGCCGTCAAAGAGGCGTTTGCATCATGAGTGGTACTGGAACGGTTACAAACGTTACGCTAAGGCAACCTGCATCTCCTGGAGCGGTTGTTACTCTTCATGGAAGATTTGAGATTCTTTCGTTGGCTGGATCGTTTCTTCCACCACCTGCTCCGCCCGCTGCTTCTGGATTGACGATATATTTAGCGGGCGGACAAGGGCAGGTTGTTGGTGGAAGTGTTGTTGGTGCTTTGATTGCTTCTGGACCTGTTGTTATTATGTCTGCTTCTTTTAGTAACGCTGCTTATGAAAGACTACCTTTGGAAGAAGATGATGCTTCTTCTTTGCAACAACTTCAAGGTGGTGGTGGTGGTGGTTCTCCAAGTGGTGGTGGTGTTCAGCAGACACAACTTTTAGGAGATTCAACTGCTCCACTTTTTCAAGCTATGCCACCTCCTAATCATAATCATAATCCTAATGCTAATCTTCTCAATTCTGTTCAAATGCCTTCTGATAATTTCTGGCCAACTGGTCGTTCTCCTTATTGA 981 0.4587 MDQITAHGHSLPPPFHTARDLHLHHQHQQQQQQQQQQHHQFHTLQQQPDQDEQSGSSSGGGLNLTNREENSHNKFNNDFSPKLESGGGGGGGGSGGDTDSMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDVVESVNNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEEDDASSLQQLQGGGGGGSPSGGGVQQTQLLGDSTAPLFQAMPPPNHNHNPNANLLNSVQMPSDNFWPTGRSPY* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3813 326 MobiDBLite consensus disorder prediction 1 121 - -
Tpr2g3813 326 MobiDBLite consensus disorder prediction 256 276 - -
Tpr2g3813 326 CDD DUF296 131 198 IPR005175 -
Tpr2g3813 326 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 244 IPR005175 -
Tpr2g3813 326 Gene3D - 130 264 - -
Tpr2g3813 326 MobiDBLite consensus disorder prediction 27 80 - -
Tpr2g3813 326 ProSiteProfiles PPC domain profile profile. 127 263 IPR005175 -
Tpr2g3813 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 326 IPR014476 GO:0003680
Tpr2g3813 326 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 260 - -
Tpr2g3813 326 PIRSF ESCAROLA 12 326 IPR014476 GO:0003680
Tpr2g3813 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 6 326 - -
Tpr2g3813 326 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3813 Tpr-Chr2 40982561 40984284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3813 1 326 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 51.791 7.31e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3813 - - gmx:100781436 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3813 2 40982561 40984284 Tpr2g3813 2 40982561 40984284 ECH