Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3803 ATGTATCGTAGGAGAGGCGGTTATTCGCCTCTATCTTGGTTGGAGCCGTTACGCTATTCGCGGTTGATAATGGAGGAACAACGTTACGAGGTAATGCATGTGCTTGGTTCTGGCAACTTTGCCGTGACTAAGTTGGCCAAAAACATCAAAACCGGAGAACTTGTTGCTATCAAGTACATTCAAAGAGGAGAGAAGATTGATGAGAATGTTGAAAGGGAGATAATTAATCATAGATCTTTAAACCATCCACATATCATCAATTTCAAAGAGTTATTTGTGACACCCTCTCATTTGGCGATTGTCCTTGAGTATGCTGATGGTGGTGAACTATTTCATAGGATAGCCTCTAACATTATCCCTAAGGGTCGCATTACTGAAAAGGAGGCAAGATATTTCTTCCAGCAACTAATATCTGGAGTCCAGTACATGCATTCCATGCAAATTTGTCATAGGGATTTGAAATTGGAGAACACTCTATTGGATGGAAATCCAAGAACTCCTCAACTCAAAATTTGTGACTTTGGTTATTCTAAGTCTACTTTGCTGCACTCTCGACCCAAATTAGTGGTTGGAACTCCTGCATACATTGCACCAGAGATTTTATCTAGACAGGAGTATGATGGAAAGCCTGCGGATGTTTGGTCATGTGGTGTTATTCTTTATGTCATGCTAGTTGGATCATACCCATTTCAAGATCCAGAAGATCCTAAAAATTTCAGAAAGATTATTAAGAAAATAATGGATGTTCAATACTCCATACCTGGCTATGCATGTATATCTGCAGACTGTAGGCATCTCCTCTCTAGGATTTTTGTTGCCAATCCAGCTAAGAGGATCACGATCCCAGAGATACAACAACACTCTTGGTTTTTGAGATACATGCCTAGAGAAACTGTTGAACCTGGTAAAAAATGTTACCAAGAAACAAAAAATGATGAATTACCTAGGCAACAAAGCGTAGAAGAAATCATGCAGCTTCTACAAGAAGCAAGAACAACATATGTTGCTAATGTTGATGGGAATGTTGAAGAGAAAGTTGTTGATGTTAATGGTGATTTTGTGAAAGTGGAACTTGTGTGA 1080 0.3917 MYRRRGGYSPLSWLEPLRYSRLIMEEQRYEVMHVLGSGNFAVTKLAKNIKTGELVAIKYIQRGEKIDENVEREIINHRSLNHPHIINFKELFVTPSHLAIVLEYADGGELFHRIASNIIPKGRITEKEARYFFQQLISGVQYMHSMQICHRDLKLENTLLDGNPRTPQLKICDFGYSKSTLLHSRPKLVVGTPAYIAPEILSRQEYDGKPADVWSCGVILYVMLVGSYPFQDPEDPKNFRKIIKKIMDVQYSIPGYACISADCRHLLSRIFVANPAKRITIPEIQQHSWFLRYMPRETVEPGKKCYQETKNDELPRQQSVEEIMQLLQEARTTYVANVDGNVEEKVVDVNGDFVKVELV* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3803 359 ProSiteProfiles Protein kinase domain profile. 29 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3803 359 Pfam Protein kinase domain 29 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3803 359 PANTHER SERINE/THREONINE KINASE 27 338 - -
Tpr2g3803 359 Gene3D Phosphorylase Kinase; domain 1 15 104 - -
Tpr2g3803 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Tpr2g3803 359 Gene3D Transferase(Phosphotransferase) domain 1 105 297 - -
Tpr2g3803 359 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 27 338 - -
Tpr2g3803 359 SUPERFAMILY Protein kinase-like (PK-like) 10 307 IPR011009 -
Tpr2g3803 359 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Tpr2g3803 359 SMART serkin_6 29 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3803 Tpr-Chr2 40898937 40906180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3803 28 300 CBL-interacting serine-threonine protein kinases AT4G24400 41.696 1.54e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr2g3803 Pkinase 6.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3803 K14498 - gmx:100817713 448.743