Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3802 ATGAATTACTTCAATCTCCTTCTTTCTTTGTTTCTGTTGAATGCATTTTTAAAACCAGAAACGGTTTGTGGAAATGCAGAGCTAAGAGCTTTGATGGATTTGAAAACTTCTCTTGATCCAGAGGGAAAGATTCTTACTTCATGGATCAGCGATGGTAATCCATGTAGTGGTTCATTTGAAGGGGTTGCTTGTAATGATCATTGGAAAGTGGCTAATATCTCTTTGCAGGGAAAGGGACTTTCTGGTTGTTTATCTCCAGCTGTGGCTGAACTCAAATGCTTGTCAGGGTTATACTTGCATTATAACAATCTTTCTGGTGAGATACCATCACAAATTTCAAATCTTACTGAGCTTGTTGATCTTTATCTTGATGTGAATAATCTTTCCGGAACAATTCCTTCTCAGATTGGAAACATGGCTAGTCTACAAGTACTTCAGCTGGGGGATAATCAATTTGTGGGGAATATACCTGCACAGATGGGTTCCTTGAAGCAGCTTACAACTCTTGCTTTGCAATATAACAAGTTAACTGGTCGAATTCCTCTTAGCTTAGGGAACTTGGAGAATCTAAGCCGGCTAAATTTGAGTTTCAACAACTTCAGTGGTACTTTTCCAGCAACACTAGCTAATGTTTCACATTTGGAAGTTCTGGATATTCAAAACAATTCTCTATCAGGAACTGTTCCTTCTGCATTGAAGAGACTTGGGGAAGGATTCCAAGGGGCAAACAATCAAGGTTTATGTGGAGTAGATATTTTTACTTTGAGAGCTTGCAACAATAATTCAGATTTAGACGCCAGCGACATTGATACCTCGGATCAAGGCCACCTCAAAAAGGGTAATTCCGCAACGCCTCGCCCGGAGGCTGCAGATTTCCAAATGCATTGTAACCAGACTCATTGCTCAAAATCAAGGTTTCCTTTAAGTGTCGTCACAGCAGCAGGTGTTACAATCACCGCTCTCACATTCATAGTTGTTGGATTGTTTACATTTGTCAAATACCGCCGTCGAAAGCAGAAGGTTACAGCAAACTCTTCTGAAGGGAAACTTAGTCCTCAGCAGCCTAAAGGGTTATACAGAAAAAGTCCATCTACCCTGGTTAATCTTGAGTATTATAACGGATGTTATCCAATGCCCGGTGATCAAAATGCTGGGGGATTATACAGTGAATATCTAAACCAGTTTAGGTTTAATGTAGACGAAGTCGAATCTGCAACACAATATCTTTCAGAAGCAAATTTATTGTGTAAGAGCAAATTCTCAGCAATGTATAAAGGAATTCTCAGAGACGGTTCTCTTGTCGCTATTAGAAGCATTAACATGACATGCTGTAAAACCGAGGAAGCCGAATTTGTAAAGGGATTGAGCTTATTAACCTCCCTTAGACATGAAAATGTTGTTAAGCTAAGAGGTTTCTGTTGCTCAAGTAGTAGAGGTGAATGCTACCTTATTTACGACTTTGCAACGATGGGCTACCTATCTCAATACCTTGACATAGAGGATAGAAGTGACCATTTGCTTGACTGGTCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAGGGTATAGGATATCTGCATGGTGATGAAGCAAGCAAACCTTCAATAGTACACCAAAATATATCAGTGGAGAATGTTCTCCTTGACAAAGAGTTTAATCCATTGATCATGGATGCAGGACTTCCTAAGCTTCTCGCAGACGATGTTGTTTTCTCAGCTCTAAAAGTAAGTGCCGCCATGGGATACCTAGCTCCTGAATACATTACTACAGGACGCTTTACCGAGAAGAGTGACATATATGCATTTGGAGTTATTGTACTTCAAGTTTTATCTGGCAAGACAGCAATCGGAGGTTCAATACGGACAGCATTCGAGTCTTTCAGATTTGATGATTGCATCGACACAAATCTTAAGGGAAGATATTCTAGTTCTGAAGCAACGACGCTAACAAAGCTTGCAGTGCAGTGTATCCATGAGAGTCCCGACCAAAGACCAAGCATGGTGGATGTAATTCAGGAGCTAAGGGTGCTTCCGGCTAATTCATAA 2046 0.4052 MNYFNLLLSLFLLNAFLKPETVCGNAELRALMDLKTSLDPEGKILTSWISDGNPCSGSFEGVACNDHWKVANISLQGKGLSGCLSPAVAELKCLSGLYLHYNNLSGEIPSQISNLTELVDLYLDVNNLSGTIPSQIGNMASLQVLQLGDNQFVGNIPAQMGSLKQLTTLALQYNKLTGRIPLSLGNLENLSRLNLSFNNFSGTFPATLANVSHLEVLDIQNNSLSGTVPSALKRLGEGFQGANNQGLCGVDIFTLRACNNNSDLDASDIDTSDQGHLKKGNSATPRPEAADFQMHCNQTHCSKSRFPLSVVTAAGVTITALTFIVVGLFTFVKYRRRKQKVTANSSEGKLSPQQPKGLYRKSPSTLVNLEYYNGCYPMPGDQNAGGLYSEYLNQFRFNVDEVESATQYLSEANLLCKSKFSAMYKGILRDGSLVAIRSINMTCCKTEEAEFVKGLSLLTSLRHENVVKLRGFCCSSSRGECYLIYDFATMGYLSQYLDIEDRSDHLLDWSKRVSIIKGIAKGIGYLHGDEASKPSIVHQNISVENVLLDKEFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKTAIGGSIRTAFESFRFDDCIDTNLKGRYSSSEATTLTKLAVQCIHESPDQRPSMVDVIQELRVLPANS* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3802 681 Gene3D Phosphorylase Kinase; domain 1 384 487 - -
Tpr2g3802 681 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Tpr2g3802 681 Gene3D Transferase(Phosphotransferase) domain 1 489 677 - -
Tpr2g3802 681 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 676 - -
Tpr2g3802 681 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Tpr2g3802 681 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 676 - -
Tpr2g3802 681 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Tpr2g3802 681 ProSiteProfiles Protein kinase domain profile. 409 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3802 681 Gene3D Ribonuclease Inhibitor 179 245 IPR032675 -
Tpr2g3802 681 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515
Tpr2g3802 681 SUPERFAMILY Protein kinase-like (PK-like) 385 676 IPR011009 -
Tpr2g3802 681 SUPERFAMILY L domain-like 23 233 - -
Tpr2g3802 681 Pfam Protein tyrosine and serine/threonine kinase 414 674 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3802 Tpr-Chr2 40891022 40896509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3802 10 522 Miscellaneous Gene Families AT4G22730 57.089 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Tpr2g3802 PK_Tyr_Ser-Thr 7.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3802 - - mtr:MTR_5g011840 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3802 2 40891022 40896509 Tpr2g3802 2 40891022 40896509 ECH