Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3794 ATGGCAGCTAGAGTGAGGGTTTCTTTACTGGTTCTCATGAGCCTTGTCACTTACATGTCTAACACCGCAGAATCCTCTATAACCCCGGCAGAGTTTATCAAGTCTTCGTGTAGGGCTACTCGCTACCCTATTTTATGTGTTCGATGCCTCATGGGGTATGCGAGCGTGATTGGCCTAAGTGAGCGACAACTAGCCATGACTGCTCTATCAGTGAGCATATCCAGGACACGATCGAGTGCATCATTTGTGAAGAAGATATCAAAAGCAAGAGGCATCAAACCAAGGGAGTACATAGCCATTCAAGACTGCATAGAAAACATGGGTGACAGTTTGGACAGTCTTAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGATTTCGTTTGGCACATGAGCAACGTGCAAACTTGGGTCAGTGCTGCCGTTACTGATGATAACACTTGTCTTGATGGCTTTTCTGGTCCTTCCATGAAGGGAAATGTCAAGGCTGCCATCAAGAATAGAGTTGTCAATGTTACTCAAATTACAAGCAACGCACTCGCTTTGGTCAATCGCTTTGCCTCGATTCATCGAACTGTTGAAACTCCTTAA 606 0.4571 MAARVRVSLLVLMSLVTYMSNTAESSITPAEFIKSSCRATRYPILCVRCLMGYASVIGLSERQLAMTALSVSISRTRSSASFVKKISKARGIKPREYIAIQDCIENMGDSLDSLSQSVRELGSIGHAVGEDFVWHMSNVQTWVSAAVTDDNTCLDGFSGPSMKGNVKAAIKNRVVNVTQITSNALALVNRFASIHRTVETP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3794 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 189 IPR006501 GO:0004857
Tpr2g3794 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 191 IPR035513 -
Tpr2g3794 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 195 - -
Tpr2g3794 201 PANTHER PECTINESTERASE INHIBITOR 9 10 195 - -
Tpr2g3794 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 192 IPR035513 -
Tpr2g3794 201 CDD PMEI-like_3 35 193 - -
Tpr2g3794 201 SMART PMEI_2 28 187 IPR006501 GO:0004857
Tpr2g3794 201 Pfam Plant invertase/pectin methylesterase inhibitor 32 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3794 Tpr-Chr2 40854247 40854990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3794 33 188 Carbohydrate Esterase AT3G14310 31.847 3.07e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3794 - - mtr:MTR_5g012000 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3794 2 40854247 40854990 Tpr2g3794 2 40854247 40854990 ECH