Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3790 ATGAACAATTTCTCACACGTTCCTCCTGGATTTCGTTTCCATCCCACTGATGAAGAACTTGTTGATCACTATCTTAGAAAAAAGATAGCTTCCAAAAGAATTGATCTTGATATCATTAAAGATGTTGATCTCTATAAAATTGAACCGTGGGATCTACAAGAATTATGCAAAATAGGAAGTGATGAACAAACAGAATGGTATTTCTTCAGTCATAAAGATAAGAAATATCCAACTAGTAGCCGTACAAATAGAGCTACAAAAGCAGGATTCTGGAAAGCAACTGGAAGAGACAAAGCAATTTACTCAAACCATATTTCTTTGATTGGAATGAGAAAGACTCTAGTTTTCTACAAAGGAAGAGCACCCAATGGACAAAAATCTGATTGGATCATGCATGAATATCGTTTAGAAACTAATGAAAATGGAACTACTCCTCAAGAAGAAGGATGGGCTGTGTGTAAAGTGTTCAAGAAAAGAATAGCTTCAACAATGATGAGGAGAATGGATGATTCACCATGTGGATATGATGATCAAGTATCATTCATGCAATCAGAGCTTGAATCCTCTCCAAACAGAATTTCTCATGCATCATACCAACAACATTACCCTTGCAAACAAGAATACTATGATAGATTTCAATACAATATAGCCATTAATAATGATGCTAATAATTTCCTCCAACTTCCACAACTAGAAAGCCCTAAAATTCCTAATAATTTTCAGTGTTCATCATCATCAACATCACATTCACTCACTACTCATCAAGAACAACAATATTATAGCCATCAACAAAATATGCAAATGCTTTATGGTGGTAGCAATAATGATAATCAAGCTGCAGGATTAGTGGAGCAATCAAGGGATTGGAGAGTACTTGATAAATTTGTTGCTTCTCAGCTAAGTCATGATCAAGATGCTTCTAAGGAAAGTACTAGTTATTGCAATGTGGATGAACAAATTGCTTTGCTAGCAAGTGATGAGTCAAAAAAATCTGAAACTAGTCAGATTGATCACATGTGGAAGTGA 1026 0.3489 MNNFSHVPPGFRFHPTDEELVDHYLRKKIASKRIDLDIIKDVDLYKIEPWDLQELCKIGSDEQTEWYFFSHKDKKYPTSSRTNRATKAGFWKATGRDKAIYSNHISLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTTPQEEGWAVCKVFKKRIASTMMRRMDDSPCGYDDQVSFMQSELESSPNRISHASYQQHYPCKQEYYDRFQYNIAINNDANNFLQLPQLESPKIPNNFQCSSSSTSHSLTTHQEQQYYSHQQNMQMLYGGSNNDNQAAGLVEQSRDWRVLDKFVASQLSHDQDASKESTSYCNVDEQIALLASDESKKSETSQIDHMWK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3790 341 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Tpr2g3790 341 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Tpr2g3790 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 327 - -
Tpr2g3790 341 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Tpr2g3790 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 327 - -
Tpr2g3790 341 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3790 Tpr-Chr2 40813734 40818242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3790 1 335 NAC Transcription Factor Family AT1G62700 54.308 2.33e-125 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g3790 NAM 3.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3790 - - zju:107405051 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3790 2 40813734 40818242 Tpr2g3790 2 40813734 40818242 ECH
Tpr2g3790 2 40813734 40818242 Tpr5g2680 5 49028428 49033981 PCT