Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3773 ATGCAACATTCTATAATGGCTAAGACTACTCTTTTCTATTCGTTGCAATTGCTTTTGATTTTCACTTGCATGTTGTTAAATGCAGGAATTGTGACATTAGGTGCACGCCATCATCACCGCACTACCTTCAACTATTTATCTTCTTCAAATTCCTCCAAGCAACAATGGATTGAACCTATCGGTAACCGTGTAATAACGGTTGATATTAATGGTGGAGGCCAGTTCCAGTCCGTCCAGGATGCCGTCAATGCTGTCCCGGACAACAATATAATGAATGTGCTTATTCAAATAAGCGCCGGATGCTACAAAGAGAAGGTGGAGGTTCCCGCGACGAAACCATACATAACATTTCAAGGAGAGGGAAGGGAAGTGACTGTAATAGAATGGCATGATAGAGCTTCTGATCCTGGTCCCAATGGACAACAGCTTCGTACTTATCGAACTGCTTCTGTTACTGTCTTAGCCAACTATTTCTCTGCTAAGAATATCACCTTCAAGAATACAGCTCCGGCACCAATGCCAGGGATGGAAGGATGGCAAGCGGTTGCATTTCGAATATCAGGAGACAAAGCATACTTTTCCGGCTGTGGCTTCCACGGCGCACAAGACACACTTTGTGATGATGCTGGTAGGCATTATTTCAAGGAATGCTACATTGAGGGCTCCATTGATTTCATTTTTGGAAATGGCAGATCCATGTACAAGGATTGCGAGCTACATTCAATAGCAACAAGGTTCGGATCGATAGCAGCCCACGATAGGAATTACCCATATGAAAAGACAGGATTTGCATTCGTACGATGCAAAGTGACAGGTACAGGCCAACTATATGTGGGTCGTGCAATGGGCCAATACTCGAGAATAGTCTATGCATACACATACTTCGATAATATAGTTGCACCCGGCGGTTGGGACGATTGGGACCATGCCAACAACAAAAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTTGGGGACCAGGAGCAGTGGCAGTACGTGGGGTGTCATGGGCCCAAGAGTTGGATTTTAAATCTGCACATCCATTTATTAGGAAGAGCTTTGTCAATGGGAGACATTGGATTGCACCAAATGATGCTTAG 1101 0.4432 MQHSIMAKTTLFYSLQLLLIFTCMLLNAGIVTLGARHHHRTTFNYLSSSNSSKQQWIEPIGNRVITVDINGGGQFQSVQDAVNAVPDNNIMNVLIQISAGCYKEKVEVPATKPYITFQGEGREVTVIEWHDRASDPGPNGQQLRTYRTASVTVLANYFSAKNITFKNTAPAPMPGMEGWQAVAFRISGDKAYFSGCGFHGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRNYPYEKTGFAFVRCKVTGTGQLYVGRAMGQYSRIVYAYTYFDNIVAPGGWDDWDHANNKNKTVFFGVYKCWGPGAVAVRGVSWAQELDFKSAHPFIRKSFVNGRHWIAPNDA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3773 366 Pfam Pectinesterase 65 357 IPR000070 GO:0030599|GO:0042545
Tpr2g3773 366 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Tpr2g3773 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 365 - -
Tpr2g3773 366 SUPERFAMILY Pectin lyase-like 62 363 IPR011050 -
Tpr2g3773 366 Gene3D - 61 365 IPR012334 -
Tpr2g3773 366 PANTHER PECTINESTERASE 68-RELATED 30 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3773 Tpr-Chr2 40680275 40683503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3773 14 366 Carbohydrate Esterase AT5G47500 70.442 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3773 - - cam:101501763 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3773 2 40680275 40683503 Tpr2g3773 2 40680275 40683503 ECH